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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:08:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:9451100-9451119
AAGCCTTTTAATTTGTGACCTTATTTTTTA9451100GGATGTCCCGATTCATATAGATCTCAGACTTCGTTCCTGATGTATTAGTA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:9456507-9456526
AAGCCTTTTAATTTGTGACTTTATTTTTTA9456507GGATGTCCCGATTCATATAGATCTCAGACTTCGTTCCTGATGTATTAGTA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:9541573-9541592
TTGCTTTTTAATTTGTGACTTTATTTTTTA9541573GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:8907462-8907481
AAGCTTTTTAATTTGTGACTTTATTTTTTA8907462GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:9635489-9635508
AAGCCTTTTAATTTGTGACTTTATTTTTTA9635489GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:40138799-40138818
CTTACTTTTTAATTATGACTTTATTTTTTA40138799GGATGTCCCGATTCATATAGAACTCAGATTTCGTCCCTGATGTATTGCTA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:9604039-9604058
TTGCTTTTTAATTTGTGACTTTATTTTTTA9604039GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:10476568-10476587
AAGCCTTTTAATTTGTGACTTTATTTTTTA10476568GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:8845550-8845569
AAGCTTTTTAATTTGTGACTTTATTTTTTA8845550GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:9527672-9527691
AAGCCTTTTAATTTGTGACTTTATTTTTTA9527672GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:9671142-9671161
AAGCCTTTTAATTTGTGACTTTATTTTTTA9671142GGATGTCCCGATTCATATAGATCTCAGACTTCGTTCCTGATGTATTAGTA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:9003595-9003614
AAGCTTTTTAATTTGTGACTTTATTTTTTA9003595GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:9705602-9705621
AAGCCTTTTAATTTGTGACTTTATTTTTTA9705602GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:9642828-9642847
TTGCTTTTTAATTTGTGACTTTATTTTTTA9642828GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:10435326-10435345
AAGCCTTTTAATTTGTGACTTTATTTTTTA10435326GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:9532337-9532356
TTGCTTTTTAATTTGTGACTTTATTTTTTA9532337GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:10466216-10466235
AAGCCTTTTAATTTGTGACTTTATTTTTTA10466216GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:9471117-9471136
AAGCTTTTTAATTTGTGACTTTATTTTTTA9471117GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:10152243-10152262
AAGCCTTTTAATTTGTGACTTTATTTTTTA10152243GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:9406576-9406595
TTGCTTTTTAATTTGTGACTTTATTTTTTA9406576GGATGTCCCGATTCATATAGATCTCAGACTTCTTCCATGATGTATTAGTA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:10340473-10340492
AAGCCTTTTAATTTGTGACTTTATTTTTTA10340473GGATGTCCCGATTCATATAGATCTCAGACTTCATTCCTGATGTATTAGTA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:29313570-29313589
CTTACTTTTTAATTATGATTTTATTTTTTA29313570GGATGTCCCGATTCATATAGATCTCAGACTTCGTCCCTGATGTATTGCTA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:29316543-29316562
AAGCTTTTTAATGTATGACTTTATTTTTTA29316543GGATGTCCCGATTCATATAGATCTCAGACTTCGTCCCTAATATATTGCTA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:29316958-29316977
AAGCTTTTTAATGTATGACTTTATTTTTTA29316958GGATGTCCCGATTCATATAGATCTCAGACTTCGTCCCTAATACATTGCTA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:29317413-29317432
AAGCTTTTTAATGTATGACTTTATTTTTTA29317413GGATGTCCCGATTCATATAGATCTCAGACTTCGTCCCTAATATATTGCTA
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:33528480-33528499
TAGCAATACATCAGGGACGAAATCTGAGTT33528480CTATATGAATCGGGACATCCTAAAAAATAAAGTCATAATTAAAAAGTAAG
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:653357-653376
TAGCAATATATCAGGGATGAAGTCTGAGAT653357CTATATGAATCGGGACATCCTAAAAAATAGTCATACATTAAAAAGCTTAA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:656385-656404
TAGCAATACATCAGGGACGAAATCTGAGAT656385CTATATGAATCGGGACATCCTAAAAAATAAAGTCATAATTAAAAAGTAAG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:31592957-31592976
TACTAATACATCAGGAATGAAGTCTGAGAT31592957CTATATGAATCGGGACATCCTAAAAAATAAAGTCACAAATTAAAAGGCTT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:32277206-32277225
TACTAATACATCATGGAAGAAGTCTGAGAT32277206CTATATGAATCGGGACATCCTAAAAAATAAAGTCACAAATTAAAAAGCTT
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:717012-717031
TAGCAATACATCAGGGACGAAGTCTGATAT717012CTATATGAATCGGGACATCCTAAAAAATAAAGTCATAATTAAAAAGAAAG
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:30311644-30311663
TACTAATACATCAGGAACGAAGTTTGAGAA30311644CTATATGAATCGGGACATCCTAAAAAATAAAGTCACAAATTAAAAGGCTT
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:31054457-31054476
TACTAATACATCATGGACGAAATCTGAGAT31054457CTATATGAATCGGGACATCCTAAAAAATAAAGTCACAAATTAAAAAGCTT
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:21036683-21036702
TACTAATACATCATGGAAGAAGTCTGAGAT21036683CTATATGAATCGGGACATCCTAAAAAATAAAGTCACTAATTAAAAAGCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGATGTCCCGATTCATATAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGATGTCCCGATTCATATAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=GGATGTCCCGATTCATATAG&k=0&no_gap=0&offset=0&limit=50
0.292 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=CTATATGAATCGGGACATCC&k=0&no_gap=0&offset=0&limit=25
0.299 | 0.006 | cgi_end;

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