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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:35:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CH302-0002I14.R CHORI302 Branchiostoma floridae genomic clone CHORI302-0105I14.R 3', genomic survey sequence.
GS002814.2:178-197
CAGTTACATAGTCTTGTGACTGTTGTTATA178GGCAACATCTCGAACAACAATATTTCAGAGTGACTGTGACTCAAGACAAC
Rathayibacter sp. VKM Ac-2760 chromosome, complete genome.
CP047173.1:1802455-1802474
CCCCGCGTCGTCACCGAGTGCGTCGTGCCC1802455GGCAACATCTCGAACAACAAGGGCATCAACCTGCCCGGCGTCGCGGTCAA
Rathayibacter festucae strain VKM Ac-2802 chromosome, complete genome.
CP047180.1:1733058-1733077
CCCCGCGTCATCACCGAGTGCGTCGTCCCC1733058GGCAACATCTCGAACAACAAGGGCATCAACCTGCCCGGCGTCGCGGTCAA
Planctomycetes bacterium syqfu chromosome, complete genome.
CP087563.1:3253566-3253585
TTGGTCGAGGTGAAACCGTCAAACTGCTTT3253566GGCAACATCTCGAACAACAAAGCATCAACATGGTCTCCGAACGCAGAATC
Triticum monococcum genome assembly, chromosome: 3A.
OY737852.1:78421731-78421750
GTGCAGATGGATCAAGCTAGCTTTACTTGG78421731TTGTTGTTCGAGATGTTGCCTGCCATTGAAGGCGTGGCCTCGCCTCAAGT
Triticum monococcum genome assembly, chromosome: 3A.
OY737860.1:81360981-81361000
GTGCAGATGGATCAAGCTAGCTTTACTTGG81360981TTGTTGTTCGAGATGTTGCCTGCCATTGAAGGCGTGGCCTCGCCTCAAGT
Rathayibacter festucae DSM 15932 chromosome, complete genome.
CP028137.1:1764074-1764093
TTGACCGCGACGCCGGGCAGGTTGATGCCC1764074TTGTTGTTCGAGATGTTGCCGGGGACGACGCACTCGGTGATGACGCGGGG
Rathayibacter sp. VKM Ac-2804 chromosome.
CP047420.1:2570195-2570214
TTGACCGCGACGCCGGGCAGGTTGATGCCC2570195TTGTTGTTCGAGATGTTGCCGGGGACGACGCACTCGGTGATGACGCGGGG
Nephrotoma guestfalica genome assembly, chromosome: 2.
OY829914.1:57683617-57683636
CGATACTCGTTCGTCGGTCGATAAAATCGA57683617TTGTTGTTCGAGATGTTGCCGGATGGATACCAATTTATGTTTGTGGTAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCAACATCTCGAACAACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCAACATCTCGAACAACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.203 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=GGCAACATCTCGAACAACAA&k=0&no_gap=0&offset=0&limit=50
0.301 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTTGTTCGAGATGTTGCC&k=0&no_gap=0&offset=0&limit=46
0.304 | 0.004 | cgi_end;

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