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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:50:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Hyperoodon ampullatus genome assembly, chromosome: 2.
OX457057.1:27599857-27599876
CAGCTCAGTTTGGCTAAGAAGCAATGTGAT27599857GGCAATGAAAACAATGAGATATTTGTTTAAACTCCTCAGGCTGGTAAATA
UCRCS01_01aa09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa09, mRNA sequence.
CB290206.1:237-256
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA237GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
UCRCS01_06ab04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ab04, mRNA sequence.
CB293384.1:531-550
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA531GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
UCRPT01_04cg08_g3 Poncirus trifoliata CTV-challenged cDNA library - AGI Citrus trifoliata cDNA clone UCRPT01_04cg08, mRNA sequence.
CD576522.1:544-563
CTTGAAGGCCAGTTTCGTTCCGTGCTGCAA544GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGTGAGTAGAT
UCRPT01_5_005_A04_T3 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_005_T3_A04, mRNA sequence.
CX543149.1:561-580
CTTGAAGGCCAGTTTCGTTCCGTGCTGCAA561GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
UCRCS11_03G18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003G18, mRNA sequence.
DN619067.1:559-578
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA559GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CSAH-PNP1246C20 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246C20 5', mRNA sequence.
DR403756.1:578-597
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA578GGCAATGAAAACAATGAGATAGAGATCTGCCCTGAGAGTGGTGAGTAGAT
IC0AAA80AD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY292483.1:140-159
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA140GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
IC0AAA85CE09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY294478.1:555-574
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA555GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C1-100-124-E05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY656779.1:557-576
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA557GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C1-102-096-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY671231.1:572-591
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA572GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGTGAGTAGAT
CS00-C3-700-006-G01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY693000.1:563-582
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA563GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C3-700-071-F02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY698418.1:452-471
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA452GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C3-700-100-E09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY700909.1:66-85
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA66GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C3-701-034-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY704635.1:146-165
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA146GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C3-702-007-A03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY711372.1:34-53
CGCGTCCGCGGACGCGTGGGCGCGCTGCAA34GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C3-705-014-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
EY736309.1:189-208
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA189GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CS00-C3-705-026-G05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
EY737096.1:118-137
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA118GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CR05-C1-100-053-A03-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY762322.1:565-584
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA565GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGGAGATAATG
CR05-C1-102-086-H09-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY773575.1:326-345
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA326GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CR05-C1-102-082-H07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY773667.1:596-615
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA596GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CR05-C1-102-093-G07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY774388.1:615-634
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA615GGCAATGAAAACAATGAGATAGAGATCTGGCTTGAGAAGGGGGGGAGTAA
CR05-C1-103-016-E03-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence.
EY775555.1:121-140
CTTGAAGGCCCCTTACATTCCGCGCTGCAA121GGCAATGAAAACAATGAGATATAGATCTGCCTTGAGAGTGGAGATAATGC
CR05-C3-701-005-D09-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY793341.1:574-593
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA574GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
CR05-C3-701-073-F03-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY799154.1:425-444
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA425GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
LT33-C1-003-052-C09-CT.F Tahiti lime leaf, greenhouse plant Citrus latifolia cDNA, mRNA sequence.
EY881129.1:586-605
CTTGAAGGCCAGTTCCGTTCTGCGCTGCAA586GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
C31001A09EF AbioticL1 Citrus clementina cDNA clone C31001A09, mRNA sequence.
FC868494.1:575-594
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA575GGCAATGAAAACAATGAGATACAGATCTGCCTTGAGAGTGGAGATAATGC
IC0AAA85CE09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA85CE09, mRNA sequence.
FC879093.1:555-574
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA555GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
IC0AAA80AD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA80AD07, mRNA sequence.
FC908096.1:140-159
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA140GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGC
Saururus chinensis isolate CL-2023b chromosome 3.
CP141142.1:49598204-49598223
ATGGGTCTCGTGGTGGTTGGGCACTAGTTT49598204GGCAATGAAAACAATGAGATGTGACAAAATATTGATACAATCCAAAATAT
Phragmites australis genome assembly, chromosome: 8.
OY282619.1:33699042-33699061
TGGTTAAGGCCATCTACATGATGCAGCTAG33699042GGCAATGAAAACAATGAGATTTTAGTCTTCTCTGGAAGTCAGGGAACACT
Hibiscus tridactylites genome assembly, chromosome: 7.
OY288271.1:88082884-88082903
TCATACTAGCAAAACACATAGCCAGTAAAC88082884GGCAATGAAAACAATGAGATGAAATATTGAAAAAAAACAAAAAAGACGTG
Citrus sinensis genome assembly, chromosome: 6.
OY754323.1:6629694-6629713
CTTGAAGGCCAGTTCCGTTCCGCGCTGCAA6629694GGCAATGAAAACAATGAGATAGAGATCTGCCTTGAGAGTGGTGAGTAGAT
Bordetella sp. J329 chromosome, complete genome.
CP021250.1:1948773-1948792
CATGTTCAACAGGCCGACCAGCAGCAAGGC1948773GGCAATGAAAACAATGAGATAGCCCAATCCCATGCGCAACATGGGCGCTT
Kerstersia gyiorum strain SWMUKG01 chromosome, complete genome.
CP033936.1:1988177-1988196
CATGTTCAACAGACCGACCAGCAGCAAGGC1988177GGCAATGAAAACAATGAGATAGCCCAATCCCATGCGCAACATGGGCGCTT
Agrotis puta genome assembly, chromosome: 4.
OW964170.2:7703576-7703595
AATGTATTTTCGTCTGAATTCCAATAGTTT7703576GGCAATGAAAACAATGAGATGGTACTGACCGCCATCAGCGTAAGTTTCGG
5_Tge_b3v08.
OE839977.1:201643-201662
TATAATAAAAGCTTTTGTCCTACATACAAA201643ATCTCATTGTTTTCATTGCCTTCTAATAAATTCTTGGCACAAAGATCATC
Ocypus olens genome assembly, chromosome: 1.
OU343047.1:69634378-69634397
TTATGGGTTCAACTAATCCTTGCGAGCAAT69634378ATCTCATTGTTTTCATTGCCATTACAGCATCTCTAAACTTCCTAAACACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCAATGAAAACAATGAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCAATGAAAACAATGAGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.126 | 2.118 | search_plus_done; http://172.18.8.135:50400/match?q=GGCAATGAAAACAATGAGAT&k=0&no_gap=0&offset=0&limit=50
2.253 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTCATTGTTTTCATTGCC&k=0&no_gap=0&offset=0&limit=14
2.254 | 0.001 | cgi_end;

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