GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:01:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:36127868-36127887
TTGTATCGAGTCTTGGAGAAGGGTTACAAT36127868TCCATGCCTTTTAATGTGCCAGGAACTCCATTTCACAAAGCAATGAATGT
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:33905039-33905058
TTGTATCGAGTCTTGGAGAAGGGTTACAAT33905039TCCATGCCTTTTAATGTGCCAGGAACTCCATTTCACAAAGCAATGAATGT
Chamaenerion angustifolium genome assembly, chromosome: 13.
OX328277.1:20927983-20928002
GGGGATGATACTATGACACAGATAGGAATA20927983TCCATGCCTTTTAATGTGCCTTTTAATGACGGTGGAATTATTTGCATTCT
Hordeum bulbosum genome assembly, chromosome: 7H_2.
OY737405.1:171630845-171630864
CATTCACATTGATATCTATTAAGAGGCATC171630845TCCATGCCTTTTAATGTGCCTAGTCAATGTGACCATCTTCTCCTTTTTGT
Asterias amurensis isolate Qingdao Taiping Cape Park chromosome 11.
CP134962.1:10862863-10862882
TACATTTATTTTGAGTAATTACCAATAGTT10862863TCCATGCCTTTTAATGTGCCCTACTTTTAGAAGAGCCATGAGGTAGGCTG
Glyphotaelius pellucidus genome assembly, chromosome: 16.
OW386553.1:11497452-11497471
GGTCTGAGAAAACGGCATTCAAAGTTCGAC11497452TCCATGCCTTTTAATGTGCCCCCATGCAATTGGTGATTTTTAAAAGCCGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCACATTAAAAGGCATGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCACATTAAAAGGCATGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=GGCACATTAAAAGGCATGGA&k=0&no_gap=0&offset=0&limit=50
0.138 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TCCATGCCTTTTAATGTGCC&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.004 | cgi_end;

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