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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 15:16:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Citrus unshiu cDNA, clone: pcMFRI616.140, 5'-end sequence.
C23914.1:200-219
ACCTGATCGGCTCTTGCAATACCACAACGG200GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGG
USDA-FP_116000-993 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-14_B09 5', mRNA sequence.
CF419055.1:189-208
GCCTGATCGGCTCTTGCAATACCACAACGG189GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGAAAGT
CGF1004278_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IF_H06 5', mRNA sequence.
CK933824.1:225-244
GCCTGATCGGCTCTTGCAATACCACAACGG225GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004227_H09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_H09 5', mRNA sequence.
CK934702.1:226-245
GCCTGATCGGCTCTTGCAATACCACAACGG226GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004554_F04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F04 5', mRNA sequence.
CK935523.1:222-241
GCCTGATCGGCTCTTGCAATACCACAACGG222GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004386_G06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IVF_G06 5', mRNA sequence.
CK936118.1:105-124
ACCTGATCGGCTCTTGCAATACCACAACGG105GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004439_B10 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_B10 5', mRNA sequence.
CK938717.1:49-68
GCCTGATCGGCTCTTGCAATACCACAACGG49GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004436_G12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_G12 5', mRNA sequence.
CK938896.1:213-232
ACCTGATCGGCTCTTGCAATACCACAACGG213GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004436_B04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B04 5', mRNA sequence.
CK938953.1:214-233
GCCTGATCGGCTCTTGCAATACCACAACGG214GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004751_E01 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_E01 5', mRNA sequence.
CK939376.1:217-236
ACCTGATCGGCTCTTGCAATACCACAACGG217GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004747_D11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_D11 5', mRNA sequence.
CK939663.1:221-240
GCCTGATCGGCTCTTGCAATACCACAACGG221GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004747_A08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_A08 5', mRNA sequence.
CK939687.1:213-232
ACCTGATCGGCTCTTGCAATACCACAACGG213GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCACATGGTATGGCAAGT
CGF1004746_C02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_C02 5', mRNA sequence.
CK939740.1:224-243
GCCTGATCGGCTCTTGCAATACCACAACGG224GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004745_F02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_F02 5', mRNA sequence.
CK939777.1:223-242
GCCTGATCGGCTCTTGCAATACCACAACGG223GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004745_D07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_D07 5', mRNA sequence.
CK939803.1:223-242
GCCTGATCGGCTCTTGCAATACCACAACGG223GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004745_C02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_C02 5', mRNA sequence.
CK939809.1:184-203
GCCTGATCGGCTCTTGCAATACCACAACGG184GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004743_E06 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IIIF_E06 5', mRNA sequence.
CK939948.1:223-242
ACCTGATCGGCTCTTGCAATACCACAACGG223GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CGF1004742_B12 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IIF_B12 5', mRNA sequence.
CK940048.1:217-236
ACCTGATCGGCTCTTGCAATACCACAACGG217GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
UCRCS08_0012P08_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0012P08, mRNA sequence.
CV720136.1:189-208
GCCTGATCGGCTCTTGCAATACCACAACGG189GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
UCRCS09_23G02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-23G02-N4-1-5.g, mRNA sequence.
CX048797.1:186-205
ACCTGATCGGCTCTTGCAATACCACAACGG186GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
Citrus unshiu mRNA, clone: MWYF991, 5'-end sequence, expressed in whole fruit.
DC895370.1:180-199
GCCTGATCGGCTCTTGCAATACCACAACGG180GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
wca02a08 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02a08 5', mRNA sequence.
DN134841.1:212-231
GCCTGATCGGCTCTTGCAATACCACAACGG212GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
wca02e08 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02e08 5', mRNA sequence.
DN134869.1:212-231
GCCTGATCGGCTCTTGCAATACCACAACGG212GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
wca02f01 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02f01 5', mRNA sequence.
DN134874.1:212-231
GCCTGATCGGCTCTTGCAATACCACAACGG212GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
wca02g10 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02g10 5', mRNA sequence.
DN134890.1:212-231
GCCTGATCGGCTCTTGCAATACCACAACGG212GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
wca03a10 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03a10 5', mRNA sequence.
DN134903.1:212-231
GCCTGATCGGCTCTTGCAATACCACAACGG212GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
wca04a11 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone wca04a11 5', mRNA sequence.
DN134967.1:225-244
GCCTGATCGGCTCTTGCAATACCACAACGG225GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CSAD-PNP1242G07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242G07 5', mRNA sequence.
DR405416.1:228-247
GCCTGATCGGCTCTTGCAATACCACAACGG228GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CSAD-PNP1242O11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242O11 5', mRNA sequence.
DR405582.1:227-246
GCCTGATCGGCTCTTGCAATACCACAACGG227GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CSAD-PNP1242O24 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242O24 5', mRNA sequence.
DR405593.1:227-246
GCCTGATCGGCTCTTGCAATACCACAACGG227GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
KN0AAP3YF22FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261588.1:200-219
ACCTGATCGGCTCTTGCAATACCACAACGG200GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
IC0AAA27DF06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269788.1:203-222
ACCTGATCGGCTCTTGCAATACCACAACGG203GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
KN0AAP7YF08FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY270660.1:197-216
ACCTGATCGGCTCTTGCAATACCACAACGG197GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
IC0AAA29DG02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY271637.1:192-211
ACCTGATCGGCTCTTGCAATACCACAACGG192GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
IC0AAA60CD11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY284159.1:200-219
ACCTGATCGGCTCTTGCAATACCACAACGG200GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
IC0AAA80DH09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY292797.1:195-214
ACCTGATCGGCTCTTGCAATACCACAACGG195GGCACTTCTTTCAGGCAAAATTGCCATCAATCTCATATGGTATGGCAAGT
IC0AAA81CC09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY293002.1:200-219
ACCTGATCGGCTCTTGCAATACCACAACGG200GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
KN0AAQ2YF04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302203.1:194-213
ACCTGATCGGCTCTTGCAATACCACAACGG194GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CTYF07O24F Citrus unshiu young fruit Citrus unshiu cDNA clone CTYF07O24, mRNA sequence.
ES439705.1:249-268
GCCTGATCGGCTCTTGCAATACCACAACGG249GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CS00-C1-101-011-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY659554.1:199-218
ACCTGATCGGCTCTTGCAATACCACAACGG199GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CS00-C1-401-023-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY676528.1:204-223
GCCTGATCGGCTCTTGCAATACCACAACGG204GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CR05-C1-100-007-H01-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY758767.1:194-213
ACCTGATCGGCTCTTGCAATACCACAACGG194GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CR05-C1-100-065-E08-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY763291.1:214-233
ACCTGATCGGCTCTTGCAATACCACAACGG214GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CR05-C3-700-106-C01-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY788235.1:114-133
ACCTGATCGGCTCTTGCAATACCACAACGG114GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CR05-C3-701-089-C09-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY801134.1:208-227
ACCTGATCGGCTCTTGCAATACCACAACGG208GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
PT11-C1-900-010-E12-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY810716.1:216-235
GCCTGATCGGCTCTTGCAATACCACAACGG216GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGAAAGT
PT11-C1-900-062-F02-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY815326.1:204-223
GCCTGATCGGCTCTTGCAATACCACAACGG204GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGAAAGT
PT11-C1-900-076-H11-CT.F Poncirus trifoliata leaf, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY816409.1:204-223
GCCTGATCGGCTCTTGCAATACCACAACGG204GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGAAAGT
CA26-C1-002-066-B06-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY847190.1:200-219
ACCTGATCGGCTCTTGCAATACCACAACGG200GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
CA26-C1-002-073-B02-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY847960.1:206-225
ACCTGATCGGCTCTTGCAATACCACAACGG206GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:8708906-8708925
GCCTGATCGGCTCTTGCAATACCACAACGG8708906GGCACTTCTTTCAGGCAAAATTGCAATCAATCTCATATGGTATGGCAAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCACTTCTTTCAGGCAAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCACTTCTTTCAGGCAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.325 | 2.316 | search_plus_done; http://172.18.8.135:50400/match?q=GGCACTTCTTTCAGGCAAAA&k=0&no_gap=0&offset=0&limit=50
2.462 | 0.137 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTGCCTGAAAGAAGTGCC&k=0&no_gap=0&offset=0&limit=0
2.462 | 0.000 | cgi_end;

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