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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:56:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GM89015B1E01.r2 Gm-r1089 Glycine max cDNA clone Gm-r1089-5593 3, mRNA sequence.
CO985840.1:75-94
ACAAGACATTGAATATTGAGGAGGATGGCA75GGCATACCTGTCGTGTTGTGCAACACGCGGAAGGAGAAGGAGGATGACAT
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:2790756-2790775
ACAAGACATTGAATATTGAGGAGGATGGCA2790756GGCATACCTGTCGTGTTGTGCAACACGCGGAAGGAGAAGGAGGATGACAT
Sequence 4423 from Patent EP2148885.
HI533451.1:167-186
ATGTCATCCTCCTTCTCCTTCCGCGTGTTG167CACAACACGACAGGTATGCCTGCCATCCTCCTCAATATTCAATGTCTTGT
Sequence 4423 from patent US 9271455.
HL706786.1:167-186
ATGTCATCCTCCTTCTCCTTCCGCGTGTTG167CACAACACGACAGGTATGCCTGCCATCCTCCTCAATATTCAATGTCTTGT
Sequence 696 from patent US 11174491.
MY700965.1:1054-1073
ATGTCATCCTCCTTCTCCTTCCGCGTGTTG1054CACAACACGACAGGTATGCCTGCCATCCTCCTCAATATTCAATGTCTTGT
sam05g08.y1 Gm-c1063 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1063-4911 5', mRNA sequence.
BM885839.1:327-346
ATGTCATCCTCCTTCTCCTTCCGCGTGTTG327CACAACACGACAGGTATGCCTGCCATCCTCCTCAATATTCAATGTCTTGT
Glycine max cDNA, clone: GMFL02-24-B09, 5'end.
DB963725.1:481-500
ATGTCATCCTCCTTCTCCTTCCGCGTGTTG481CACAACACGACAGGTATGCCTGCCATCCTCCTCAATATTCAATGTCTTGT
Glycine max cDNA, clone: GMFL02-24-B09, 3'end.
DB981351.1:468-487
ATGTCATCCTCCTTCTCCTTCCGCGTGTTG468CACAACACGACAGGTATGCCTGCCATCCTCCTCAATATTCAATGTCTTGT
Triticum aestivum genome assembly, chromosome: 3B.
LR862515.1:591614636-591614655
CTTCTCGATCTGATTACTGCTCGAAGATAA591614636CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum aestivum genome assembly, chromosome: 3B.
LR862536.1:580545812-580545831
CTTCTCGATCTGATTACTGCTCGAAGATAA580545812CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum aestivum genome assembly, chromosome: 3B.
LR865465.1:591972088-591972107
CTTCTCGATCTGATTACTGCTCGAAGATAA591972088CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum aestivum genome assembly, chromosome: 3B.
LR865746.1:591473981-591474000
CTTCTCGATCTGATTACTGCTCGAAGATAA591473981CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum aestivum genome assembly, chromosome: 3B.
LR877316.1:586384176-586384195
CTTCTCGATCTGATTACTGCTCGAAGATAA586384176CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:567178040-567178059
CTTCTCGATCTGATTACTGCTCGAAGATAA567178040CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum aestivum genome assembly, chromosome: 3B.
OU015728.1:589736378-589736397
CTTCTCGATCTGATTACTGCTCGAAGATAA589736378CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC
Triticum aestivum genome assembly, chromosome: 3B.
OU343178.1:592583447-592583466
CTTCTCGATCTGATTACTGCTCGAAGATAA592583447CACAACACGACAGGTATGCCTGGATCGTAACTCGCCGATGATATTCATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCATACCTGTCGTGTTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCATACCTGTCGTGTTGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.226 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=GGCATACCTGTCGTGTTGTG&k=0&no_gap=0&offset=0&limit=50
0.555 | 0.329 | search_minus_done; http://172.18.8.135:50400/match?q=CACAACACGACAGGTATGCC&k=0&no_gap=0&offset=0&limit=48
0.564 | 0.009 | cgi_end;

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