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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 19:24:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST265312 tomato callus, TAMU Solanum lycopersicum cDNA clone cLEC10G22, mRNA sequence.
AI895869.1:10-31
GATTTATTA10GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAG
EST275774 tomato callus, TAMU Solanum lycopersicum cDNA clone cLEC35K24 similar to cytochrome P450, putative, mRNA sequence.
AW032320.1:323-344
GGAGGGGAGACTAGTAAAGATGACTTACTA323GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
EST541634 tomato callus Solanum lycopersicum cDNA clone cLEC74M14 5' end, mRNA sequence.
BI921731.1:208-229
GGAGGGGAGACTAGTAAAGATGACTTACTA208GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
EST735772 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCBS84 5' end, mRNA sequence.
CK252135.1:583-604
GAGACTAGTACTAATAATGAAGATTTATTA583GGCATATTACTTGAATCCAATACGAAAGAAATTGAACAACATGGAAACAAAG
53361.1 After-Cooking Darkening C Solanum tuberosum cDNA clone 53361 5', mRNA sequence.
CV430215.1:566-587
GGAGGGGAGACTAGTAAAGATGACTTATTA566GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
50349.1 Late Blight-Challenged Tubers Solanum tuberosum cDNA clone 50349 5', mRNA sequence.
DN589296.1:654-675
GCAGGGGAGACTAATAATGAAGATTTATTA654GGCATATTACTTGAATCCAATACGAAAGAAATTTGAACAACACGGAAGCAAA
CSRLCD001_08-B10-pAL17d Healthy leaf tissue Solanum phureja cDNA, mRNA sequence.
FG646330.1:276-297
GGAGGGGAGACTAGTAAAGATGACTTATTA276GGCATATTACTTGAATCCAATAAGAGAGAAATTGAACAACATGGAAGCAAGG
Solanum torvum mRNA, clone: TVR02B08, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS105558.1:64-85
GCAGGGGAGACTAGTAAAGATGACTTATTG64GGCATATTACTTGAATCCAATATGAAAGAAGTTGAAAAACGCGGAAACAAAG
Solanum lycopersicum DNA, clone: MTBAC003H23_T7.
FT228948.1:648-669
GCAGGGGAGACTAGTAAAAATGACTTATTA648GGCATATTACTTGAATCCAATATGAAAGAAATCGAACAACATGGAAGCAAAG
Solanum lycopersicum DNA, clone: MTBAC033H17_SP6.
FT246549.1:637-658
GCAGGGGAGACTAGTAAAAATGACTTACTA637GGCATATTACTTGAATCCAATATGAAAGAAATCGAACAACATGGAAGCAAAG
Solanum lycopersicum DNA, clone: MTBAC046A15_SP6.
FT254475.1:637-658
GCAGGGGAGACTAGTAAAAATGACTTATTA637GGCATATTACTTGAATCCAATATGAAAGAAATCGAACAACATGGAAGCAAAG
Solanum lycopersicum DNA, clone: MTBAC081D24_T7.
FT276417.1:649-670
GCAGGGGAGACTAGTAAAAATGACTTATTA649GGCATATTACTTGAATCCAATATGAAAGAAATCGAACAACATGGAAGCAAAG
Solanum lycopersicum DNA, clone: MTBAC109P17_T7.
FT296285.1:648-669
GCAGGGGAGACTAGTAAAAATGACTTATTA648GGCATATTACTTGAATCCAATATGAAAGAAATCGAACAACATGGAAGCAAAG
1061064154114_TF POTATO-F-03-40KB Solanum phureja genomic clone 1061064154114, genomic survey sequence.
GS699419.1:427-448
GCAGGGGAGACTAATAATGAAGATTTATTA427GGCATATTACTTGAATCCAATACGAAAGAAATTG
Solanum lycopersicum cDNA, clone: LEFL1012DH10, HTC in leaf.
AK320760.1:963-984
GGAGGGGAGACTAGTAAAGATGACTTACTA963GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum lycopersicum cDNA, clone: LEFL1085BF06, HTC in leaf.
AK324752.1:963-984
GCAGGGGAGACTAGTAAAGATGATTTATTA963GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAG
Solanum tuberosum strain Diploid genotype RH89-039-16 chromosome 0 clone GB084B19, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.
AC236734.2:11585-11606
GCAGGGGAGACTAGTAAAAAAGATGTATTA11585GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:316-337
ACAAGTACTAATAATAATGAAGACTTATTA316GGCATATTACTTGAATCCAATACGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:17825-17846
GCAGGGGAGACTAGTAAAGATGACTTATTA17825GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:26746-26767
GCAGGGGAGACTAGTAAAAATGACTTATTA26746GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACATGGAAGCAAGG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:86679-86700
GCAGGGGAGACTAGTAAAAATGACTTATTA86679GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:97158-97179
GCAGGGGAGCCTAGTAAAAATGACTTATTA97158GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACATGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:104577-104598
GCAGGGGAAACTAGTAAAGATGACTTATTA104577GGCATATTACTTGAATCCAATATGAGAGAAATTGAACAACACAGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:109510-109531
GCAGGGGAGGCTAGTAAAAATGACTTATTA109510GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH142A12, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC240025.1:115209-115230
GCAGGGGAGACAAGTAAAGATGACTTATTA115209GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAGG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH195I15, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC240062.1:3411-3432
GCAGGGGAAACTAGTAAAGATGACTTATTA3411GGCATATTACTTGAATCCAATATGAGAGAAATTGAACAACACAGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH195I15, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC240062.1:18467-18488
GCAGGGGAGACTAGTAAAAATGACTTATTA18467GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar RH89-039-16 chromosome 7 clone RH195I15, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC240062.1:140282-140303
GCAGGGGAGCCTAGTAAAAATGACTTATTA140282GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACATGGAAGCAAAG
Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0166A09, complete sequence.
AC210359.1:65129-65150
GGAGGGGAGACTAGTAAAGATGACTTACTA65129GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0166A09, complete sequence.
AC210359.1:89762-89783
GAGACTAGTAACAATAATGAAGATTTATTA89762GGCATATTACTTGAATCCAATACGAAAGAAATTGAACAACATGGAAACAAAG
Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0166A09, complete sequence.
AC210359.1:108229-108250
GCAGGGGAGACTAGTAAAGATGATTTATTA108229GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAG
Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0166A09, complete sequence.
AC210359.1:116450-116471
GCAGGGGAGGCTAGTAAAACTGACTTATTA116450GGCATATTACTTGAATCCAATATGAGAGAAATTAAACAACACAGAAGCAATG
Solanum lycopersicum Micro-Tom DNA, chromosome 7, draft genome sequence.
AP028941.1:65984675-65984696
GCAGGGGAGGCTAGTAAAAATGACTTATTA65984675GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum lycopersicum cultivar I-3 chromosome 7.
CP023763.1:63499359-63499380
GCAGGGGAGGCTAGTAAAAATGACTTATTA63499359GGCATATTACTTGAATCCAATATGAAAGAAATTAAACAACACGGAAACAAGG
Solanum tuberosum cultivar P8 chromosome 9.
CP046687.1:54889415-54889436
GGAGGGGAGACTAGTAAAGATGACTTATTA54889415GGCATATTACTTGAATCCAATAWGARAGAAATTGAACAACAYGGAAGCAAAG
Solanum tuberosum cultivar P8 chromosome 9.
CP046687.1:54898851-54898872
GCAGGGGAGACTAATAATGAAGATTTATTA54898851GGCATATTACTTGAATCCAATACGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar P8 chromosome 7.
CP046689.1:50600139-50600160
GCAGGGGAAACTAGTAAAAATGACTTATTA50600139GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum tuberosum cultivar MSH/14-112 chromosome 9.
CP046693.1:54902237-54902258
GGAGGGGAGACTAGTAAAGATGACTTATTA54902237GGCATATTACTTGAATCCAATAWGAGAGAAATTGAACAACAYGGAAGCAAAG
Solanum tuberosum cultivar MSH/14-112 chromosome 9.
CP046693.1:54907938-54907959
GGAGGGGAGACTAGTAAAGATGACTTATTG54907938GGCATATTACTTGAATCCAATATGAAAGAAATYGAACTTCATGGTAGAAAAG
Solanum tuberosum cultivar MSH/14-112 chromosome 9.
CP046693.1:54911673-54911694
GCAGGGGAGACTAATAATGAAGATTTATTA54911673GGCATATTACTTGAATCCAATACGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar MSH/14-112 chromosome 7.
CP046700.1:50600991-50601012
GCAGGGGAAACTAGTAAAAATGACTTATTA50600991GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAAMAAGG
Solanum pinnatisectum cultivar CGN17745 chromosome 9.
CP047560.1:54887974-54887995
GGAGGGGAGACTAGTCAAGATGACTTATTG54887974GGCATATTACTTGAATCCAATATGAAAGAAATTGAACTTCATGGTAGAAAAG
Solanum pinnatisectum cultivar CGN17745 chromosome 9.
CP047560.1:54891709-54891730
GCAGGGGAGACTAATAATGAAGACTTATTA54891709GGCATATTACTTGAATCCAATACGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum tuberosum cultivar Solyntus chromosome 7.
CP055240.1:33035945-33035966
AGCAGGGGAAACTAGTAAAATGACTTATTA33035945GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum tuberosum cultivar Solyntus chromosome 7.
CP055240.1:33193091-33193112
GCAGGGGAAACTAGTAAAAATGACTTATTA33193091GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum tuberosum cultivar Solyntus chromosome 7.
CP055240.1:33510314-33510335
GCAGGGGAAACTAGTAAAAATGACTTATTA33510314GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACATGGAAACAAGG
Solanum verrucosum cultivar 11H23 chromosome 7.
CP133618.1:44663986-44664007
GCAGGGGAAACTAGTAAAAATGACTTATTA44663986GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum pennellii chromosome ch07, complete genome.
HG975446.1:74552553-74552574
GCAGGGGAGGCTAGTAAAAATGACTTATTA74552553GGCATATTACTTGAATCCAATATGAAAGAAATTAAACAACACGGAAACAAGG
Solanum lycopersicum chromosome ch07, complete genome.
HG975519.1:60822957-60822978
GCAGGGGAGGCTAGTAAAAATGACTTATTA60822957GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum lycopersicum genome assembly, chromosome: 7.
OU640350.1:64452303-64452324
GCAGGGGAGGCTAGTAAAAATGACTTATTA64452303GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAGG
Solanum dulcamara genome assembly, chromosome: 6.
OX359257.1:5191514-5191535
GCAGGGGAGACTAGTAAAGATGACTTATTA5191514GGCATATTACTTGAATCCAATAGGAAAGAAATTGAACAACACGGAAACAAAG
Solanum dulcamara genome assembly, chromosome: 6.
OX359257.1:5223678-5223699
GAGACTAGTAATAATAATGAAGACTTATTA5223678GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAGCACGGAAGTAAAG
Solanum dulcamara genome assembly, chromosome: 6.
OX359257.1:5239950-5239971
GCAGGGGAGACTAGTAAAAATGACTTATTA5239950GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG
Solanum dulcamara genome assembly, chromosome: 6.
OX359257.1:5262304-5262325
GCAGGGGAGACGAATAAAGATGACTTATTA5262304GGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCATATTACTTGAATCCAATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCATATTACTTGAATCCAATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.886 | 0.877 | search_plus_done; http://172.18.8.135:50400/match?q=GGCATATTACTTGAATCCAATA&k=0&no_gap=0&offset=0&limit=50
1.024 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=TATTGGATTCAAGTAATATGCC&k=0&no_gap=0&offset=0&limit=0
1.024 | 0.000 | cgi_end;

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