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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:06:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

BOHMJ59TR BOHM Brassica oleracea genomic clone BOHMJ59, genomic survey sequence.
BH569689.1:321-340
AAATATTACGATGAGATTATGTTAAGCTGC321GGCCTGCCTCGATGATATACAACAAAATAGCATTCCATGAGAAGAGAGAT
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:21813542-21813561
AGAAATATTGATGAGATTATGTTAAGCTGT21813542GGCCTGCCTCGATGATATACAACAAAATAGAATTCCATGAGAAGAGAGAT
Brassica napus genome assembly, chromosome: A03.
HG994357.1:21799760-21799779
AGAAATATTGATGAGATTATGTTAAGCTGT21799760GGCCTGCCTCGATGATATACAACAAAATAGAATTCCATGAGAAGAGAGAT
Brassica napus genome assembly, chromosome: C07.
HG994371.1:44980547-44980566
AAATATTACGATGAGATTATGTTAAGCTGC44980547GGCCTGCCTCGATGATATACAACAAAATAGCATTCCATGGAGAAGAGAGA
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:47854424-47854443
AAATATTACGATGAGATTATGTTAAGCTGC47854424GGCCTGCCTCGATGATATACAACAAAATAGCATTCCATGGAGAAGAGAGA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:10811009-10811028
TCTCTCTTCTCCATGGAATGCTATTTTGTT10811009GTATATCATCGAGGCAGGCCGCAGCTTAACATAATCTCATCGTAATATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCCTGCCTCGATGATATAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCCTGCCTCGATGATATAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.200 | 0.191 | search_plus_done; http://172.18.8.135:50400/match?q=GGCCTGCCTCGATGATATAC&k=0&no_gap=0&offset=0&limit=50
0.290 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=GTATATCATCGAGGCAGGCC&k=0&no_gap=0&offset=0&limit=45
0.291 | 0.001 | cgi_end;

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