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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 23:17:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

USDA-FP_121000-213 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-35_E06 5', mRNA sequence.
CF505718.1:84-103
CGAAGCTCATCCAAATTCTGGTGACATCAA84GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
USDA-FP_123000-713 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-65_D02 5', mRNA sequence.
CF508212.1:85-104
CGAAGCTCATCCAAATTCTGGTGACATCAA85GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
USDA-FP_124000-419 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-72_C07 5', mRNA sequence.
CF508916.1:86-105
CGAAGCTCATCCAAATTCTGGTGACATCAA86GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CGF1004480_H03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_H03 5', mRNA sequence.
CK937871.1:104-123
CGAAGCTCATCCAAATTCTGGTGACATCAA104GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CGF1004439_H04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H04 5', mRNA sequence.
CK938672.1:99-118
CGAAGCTCATCCAAATTCTGGTGACATCAA99GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
UCRPT01_0006F09_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0006F09, mRNA sequence.
CV705072.1:81-100
CGAACCTCATCCAAATTCTGGTGACATCAA81GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
C01002C09Rv Veg1 Citrus clementina cDNA clone C01002C09, mRNA sequence.
CX286895.1:71-90
CGAAGCTCATCCAAATTCTGGTGACATCAA71GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
UCRPT01_5_009_D04_T7 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_009_T7_D04, mRNA sequence.
CX543818.1:71-90
CCCACTTCATCCAAATTCTGGTGACATCAA71GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
UCRCS11_01K02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K02, mRNA sequence.
DN617743.1:86-105
CGAAGCTCATCCAAATTCTGGTGACATCAA86GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
UCRCS11_03M13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003M13, mRNA sequence.
DN619333.1:81-100
CGAAGCTCATCCAAATTCTGGTGACATCAA81GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
UCRCS11_05L10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005L10, mRNA sequence.
DN620715.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
USDA-FP/ARO_13737 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-04_H09 5', mRNA sequence.
DN957907.1:80-99
CGAAGCTCATCCAAATTCTGGTGACATCAA80GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
KN0AAP4YE03FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261860.1:86-105
CGAAGCTCATCCAAATTCTGGTGACATCAA86GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
IC0AAA26CG07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269343.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
IC0AAA27DC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269748.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
IC0AAA63AC04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY285055.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
IC0AAA97CE08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY299175.1:89-108
CGAAGCTCATCCAAATTCTGGTGACATCAA89GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C1-100-037-E10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY652823.1:101-120
CGAAGCTCATCCAAATTCTGGTGACATCAA101GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C1-100-051-H02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY654108.1:44-63
CGAAGCTCATTCACATTCTGGTGACATCAA44GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C1-101-028-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY660979.1:15-34
CCACGCGTCCGCAA15GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C1-102-023-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY666733.1:113-132
CGAAGCTCATCCAAATTCTGGTGACATCAA113GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C3-701-085-D04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY708636.1:92-111
CGAAGCTCATCCAAATTCTGGTGACATCAA92GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C3-702-034-H01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY713779.1:93-112
CGAAGCTCATCCAAATTCTGGTGACATCAA93GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CS00-C3-702-060-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY715933.1:87-106
CGAAGCTCATCCAAATTCTGGTGACATCAA87GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CR05-C1-100-053-G12-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY762394.1:92-111
CGAAGCTCATCCAAATTCTGGTGACATCAA92GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
CR05-C1-100-071-G08-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY763712.1:92-111
CGAAGCTCATCCAAATTCTGGTGACATCAA92GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
CR05-C1-102-028-C03-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY768559.1:107-126
CGAAGCTCATCCAAATTCTGGTGACATCAA107GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
CR05-C1-102-058-E04-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY772007.1:75-94
CGAAGCTCATCCAAATTCTGGTGACATCAA75GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
CR05-C1-102-058-E07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY772010.1:75-94
CGAAGCTCATCCAAATTCTGGTGACATCAA75GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
CR05-C1-103-100-D07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence.
EY783369.1:89-108
CGAAGCTCATCCAAATTCTGGTGACATCAA89GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
CR05-C3-701-022-B07-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY794624.1:103-122
CGAAGCTCATCCAAATTCTGGAGACATCAA103GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
C31103H11EF AbioticR1 Citrus reshni cDNA clone C31103H11, mRNA sequence.
FC869666.1:103-122
CGAAGCTCATCCAAATTCTGGTGACATCAA103GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
IC0AAA26CG07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA26CG07, mRNA sequence.
FC887787.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
IC0AAA63AC04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA63AC04, mRNA sequence.
FC893272.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
IC0AAA97CE08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA97CE08, mRNA sequence.
FC910129.1:89-108
CGAAGCTCATCCAAATTCTGGTGACATCAA89GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
IC0AAA27DC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27DC02, mRNA sequence.
FC915593.1:83-102
CGAAGCTCATCCAAATTCTGGTGACATCAA83GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
KN0AAP4YE03FM1 TF Citrus clementina cDNA clone KN0AAP4YE03, mRNA sequence.
FC927664.1:86-105
CGAAGCTCATCCAAATTCTGGTGACATCAA86GGCGCCACTCCTACCTTCCCATCGTCAAATCCAGCGGTCACCAAGCTCCC
QM0AAC21CE07FM1 CCH3 Citrus clementina genomic clone CCH3037J13, genomic survey sequence.
ET112134.1:632-651
CGAAGCTCATCCAAATTCTGGTGACATCAA632GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
QM0AAC21DE07FM1 CCH3 Citrus clementina genomic clone CCH3037J14, genomic survey sequence.
ET112280.1:632-651
CGAAGCTCATCCAAATTCTGGTGACATCAA632GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
Citrus sinensis vacuolar citrate/H+ symporter mRNA, complete cds.
EF028327.1:98-117
CGAAGCTCATCCAAATTCTGGTGACATCAA98GGCGCCACTCCTACCTTCCCATCGTCAAATCCAACGGTCACCAAGCTCCC
Miltochrista miniata genome assembly, chromosome: 4.
OW121751.1:25451622-25451641
ATGCATCGCTGGGGGGAACTCAGTGCCTAG25451622GGCGCCACTCCTACCTTCCCACCTTTTCCCACCCTCAAGTCCACTCCCAA
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:31677975-31677994
GGGAGCTTGGTGACCGTTGGATTTGACGAT31677975GGGAAGGTAGGAGTGGCGCCTTGATGTCACCAGAATTTGGATGAGCTTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCGCCACTCCTACCTTCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCGCCACTCCTACCTTCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.184 | 2.175 | search_plus_done; http://172.18.8.135:50400/match?q=GGCGCCACTCCTACCTTCCC&k=0&no_gap=0&offset=0&limit=50
2.339 | 0.154 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAAGGTAGGAGTGGCGCC&k=0&no_gap=0&offset=0&limit=9
2.339 | 0.001 | cgi_end;

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