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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 00:35:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-51276 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w4o11 5', mRNA sequence.
DV704478.1:80-101
TGAGGATGGTGCCGAATTAGGTACTGTTAA80GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CGN-51366 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w6e24 5', mRNA sequence.
DV704548.1:80-101
TGAGGATGGTGCCGAATTAGGTACTGTTAA80GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CGN-51795 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w9m7 5', mRNA sequence.
DV704883.1:80-101
TGAGGATGGTGCCGAATTAGGTACTGTTAA80GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CGN-52369 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w3e7 5', mRNA sequence.
DV705339.1:80-101
TGAGGATGGTGCCGAATTAGGTACTGTTAA80GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CGN-53528 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w10g22 5', mRNA sequence.
DV706202.1:77-98
TGAGGATGGTGCCGAATTATGTACTGTTAA77GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CGN-53868 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w12n4 5', mRNA sequence.
DV706451.1:80-101
TGAGGATGGTGCCGAATTAGGTACTGTTAA80GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CC-F01_017_P02 Cherry of different development stage Coffea canephora cDNA clone CC-F01_017_P02, mRNA sequence.
EE199881.1:58-79
TGAGGATGGTGCGGAATTAGGTGCTGTTAA58GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CA00-XX-PA1-013-E07-EC.F Coffea arabica PA1 Coffea arabica cDNA clone CA00-XX-PA1-013-E07-EC, mRNA sequence.
GT684459.1:93-114
TGAGGATGGTGCCGAATTAGGTACTGTTAA93GGCGCTAGAGTTGGTTGTTTGCTCGCCTAAGTAGTTCCTTCTCTTCTCTTCT
CA00-XX-CA1-018-F01-JE.F Coffea arabica CA1 Coffea arabica cDNA clone CA00-XX-CA1-018-F01-JE, mRNA sequence.
GT691087.1:85-106
TGAGGATGGTGGCGAATTAGGTACTGTTAA85GGCGCTAGAGTTGGTTGTTTGCTTGCCTGAGTAGTTCCTTCTCTTCTCTTCT
CA00-XX-FB2-007-F07-SB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-007-F07-SB, mRNA sequence.
GT704103.1:603-624
TGAGGATGGTGCCGAATTAGGTACTGTTAA603GGCGCTAGAGTTGGTTGTTTGCTCGCCTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCGCTAGAGTTGGTTGTTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCGCTAGAGTTGGTTGTTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.623 | 0.614 | search_plus_done; http://172.18.8.135:50400/match?q=GGCGCTAGAGTTGGTTGTTTGC&k=0&no_gap=0&offset=0&limit=50
0.667 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAACAACCAACTCTAGCGCC&k=0&no_gap=0&offset=0&limit=40
0.667 | 0.000 | cgi_end;

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