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2025-04-11 19:23:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Sequence 70 from Patent WO2008018790.
FB743847.1:86-105
GTTTTCGACATTGTGGGAGGCCGGCGATTG86GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGTCCCTTTCT
Mdfw2012g23.y1 Mdfw Malus domestica cDNA clone Mdfw2012g23 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CN492889.1:151-170
GTTTTCGACATTGTGGGAGGCCGACGATTG151GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfw2064o09.y1 Mdfw Malus domestica cDNA clone Mdfw2064o09 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CO067211.1:128-147
GTTTTCGACATTGTGGGAGGCCGACGATTG128GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrt3065b03.y1 Mdfrt Malus domestica cDNA clone Mdfrt3065b03 5' similar to TR:Q9XHM8 Q9XHM8 XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-LIKE PROTEIN, mRNA sequence.
CO905221.1:211-230
GTTTTCGACATTGTGGGAGGCCGACGATTG211GGCTACCAGAGGAGGACTTGAGAATATCGACTGGAGCAAAGCCCCTTTCT
Mdfrt3069o04.y1 Mdfrt Malus domestica cDNA clone Mdfrt3069o04 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV081952.1:211-230
GTTTTCGACATTGTGGGAGGCCGACGATTG211GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrt3077c12.y1 Mdfrt Malus domestica cDNA clone Mdfrt3077c12 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV085195.1:423-442
GTTTTCGACATTGTGGGAGGCCGACGATTG423GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrt3082f23.y1 Mdfrt Malus domestica cDNA clone Mdfrt3082f23 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV091856.1:402-421
GTTTTCGACATTGTGGGAGGCCGACGATTG402GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdlv4-4048a15.y1 Mdlv4 Malus domestica cDNA clone Mdlv4-4048a15 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CX023605.1:571-590
GTTTTCGACTTTGTGGGAGGCCGACGATTG571GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGGAGCAACCCCCTTTTC
Pyrus pyrifolia cDNA, clone: 94Ni5G11.
DC993396.1:85-104
GTTTTCGACATTGTGGGAGGCCGACGATTG85GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdas9010D22.g1 Apple_EST_Mdas Malus domestica cDNA similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hirsutum
DR995431.1:613-632
GTTTTCGACATTGTGGGAGGCCGACGATTG613GGCTACCAGAGGAGGACTTGAGAAGA
Mdfrb3143H01.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thali
DY256020.1:55-74
GTTTTCGACATTGTGGGAGGCCGACGATTG55GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
010927ABDA003582HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA003582, mRNA sequence.
EB143333.1:282-301
GTTTTCGACATTGTGGGAGGCCGACGATTG282GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
010928ABDA003268HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA003268, mRNA sequence.
EB143416.1:282-301
GTTTTCGACATTGTGGGAGGCCGACGATTG282GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
010928ABDA004203HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA004203, mRNA sequence.
EB143556.1:282-301
GTTTTCGACATTGTGGGAGGCCGACGATTG282GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
010928ABDA004228HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA004228, mRNA sequence.
EB143562.1:282-301
GTTTTCGACATTGTGGGAGGCCGACGATTG282GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
010928ABDA004299HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA004299, mRNA sequence.
EB143582.1:282-301
GTTTTCGACATTGTGGGAGGCCGACGATTG282GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
010929ABDA005248HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA005248, mRNA sequence.
EB143888.1:282-301
GTTTTCGACATTGTGGGAGGCCGACGATTG282GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
011003ABDA006848HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA006848, mRNA sequence.
EB144433.1:388-407
GTTTTCGACATTGTGGGAGGCCGACGATTG388GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
021015ABCA002730HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA002730, mRNA sequence.
EB145531.1:628-647
GTTTTCGACATTGTGGGAGGCCGACGATTG628GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdstw6030L23.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO498570.1:237-256
GTTTTCGACATTGTGGGAGGCCGACGATTG237GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdstw6033N11.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO499610.1:500-519
GTTTTCGACATTGTGGGAGGCCGACGATTG500GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfws2070D05.g1 Apple_EST_Mdfws Malus domestica cDNA 5' similar to gb|AAO92743.1| xyloglucan endotransglycosylase [Gossypium hirsutum], mRNA sequence.
GO509924.1:47-66
TTGCTGTCGCCCCATAAGGGGGGACGATTG47GGCTACCAGAGGAGGACTTGAGAAGAGGCGACTGGAGCAAAGCCCCTTTC
Mdfrs3140B05.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO519050.1:196-215
GTTTTCGACATTGTGGGAGGCCGACGATTG196GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrs3140E07.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO519121.1:613-632
GTTTTCGACATTGTGGGAGGCCGACGATTG613GGCTACCAGAGGAGGACTTGAG
Mdfrs3141D18.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO519474.1:299-318
GTTTTCGACATTGTGGGAGGCCGACGATTG299GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrs3141O05.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thali
GO519720.1:17-36
CACGAGGCGACGATTG17GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrs3142G21.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO519911.1:622-641
GTTTTCGACATTGTGGGAGGCCGACGATTG622GGCTACCAGAGGAGGACTTGAGAAGAT
Mdfrs3142N01.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO520049.1:452-471
GTTTTCGACATTGTGGGAGGCCGACGATTG452GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrs3139G05.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO520613.1:193-212
GTTTTCGACATTGTGGGAGGCCGACGATTG193GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrb3149J11.g1 Apple_EST_Mdfrb Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hir
GO521960.1:331-350
GTTTTCGACATTGTGGGAGGCCGACGATTG331GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Mdfrfu3509J09.g1 Apple_EST_Mdfrfu Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium h
GO537308.1:246-265
GTTTTCGACATTGTGGGAGGCCGACGATTG246GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Pyrus pyrifolia mRNA, clone: NLE2_29_66, 3' end sequence, expressed in leaf.
HX745543.1:574-593
GTTTTCGACATTGTGGGAGGCCGACGATTG574GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Pyrus pyrifolia mRNA, clone: NFW3_04_32, 5' end sequence, expressed in flower.
HX765219.1:200-219
GTTTTCGACATTGTGGGAGGCCGACGATTG200GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
TSA: Pyrus pyrifolia mRNA, contig: contig_886revcomp.
FX412952.1:752-771
GTTTTCGACATTGTGGGAGGCCGACGATTG752GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
TSA: Pyrus communis mRNA, contig: lc1684.
FX610271.1:508-527
GTTTTCGACATTGTGGGAGGCCGACGATTG508GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
TSA: Pyrus communis mRNA, contig: lc18610.
FX627146.1:6-25
GATTG6GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:24623762-24623781
GTTTTCGACATTGTGGGAGGCCGACGATTG24623762GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGACCAAAGCCCCTTTCT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:27077732-27077751
GTTTTCGACATTGTGGGAGGCCGACGATTG27077732GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:23973517-23973536
GTTTTCGACATTGTGGGAGGCCGACGATTG23973517GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGACCAAAGCCCCTTTCT
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:24889246-24889265
GTTTTCGACATTGTGGGAGGCCGACGATTG24889246GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGACCAAAGCCCCTTTCT
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:24364699-24364718
GTTTTCGACATTGTGGGAGGCCGACGATTG24364699GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGACCAAAGCCCCTTTCT
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:24533392-24533411
GTTTTCGACATTGTGGGAGGCCGACGATTG24533392GGCTACCAGAGGAGGACTTGAGAAGATCGACTGGAGCAAAGCCCCTTTCT
Gallus gallus breed Huxu chromosome 1.
CP100555.1:8645943-8645962
AGAGAGGAAACTGCCAGAACAAACATTATG8645943CAAGTCCTCCTCTGGTAGCCCAAGGAGCTTTTGTGGAAGATGCTGTTTCT
fl_06C04_CG10 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255018.1:218-237
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT218CAAGTCCTCCTCTGGTAGCCCAATCGTCG
Mdfwg2106L21_e22102.g1 Apple_EST_Mdfwg Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsi
GO558352.1:560-579
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT560CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAACAC
Pyrus pyrifolia mRNA, clone: NLE2_29_66, 5' end sequence, expressed in leaf.
HX769066.1:515-534
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT515CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Gallus gallus chromosome 1 clone TAM33-18M17, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.
AC195506.1:187529-187548
AGAGAGGAAACTGCCAGAACAAACATTATG187529CAAGTCCTCCTCTGGTAGCCCAAGGAGCTTTTGTGGAAGATGCTGTTGCT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:29329599-29329618
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT29329599CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:25911338-25911357
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT25911338CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:28782283-28782302
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT28782283CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:29459520-29459539
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT29459520CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Malus domestica genome assembly, chromosome: 15.
OU744556.1:29198455-29198474
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT29198455CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Malus domestica genome assembly, chromosome: 15.
OU744967.1:29398980-29398999
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT29398980CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Malus domestica genome assembly, chromosome: 15.
OU745005.1:29159186-29159205
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT29159186CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:21775338-21775357
AGAAAGGGGCTTTGCTCCAGTCGATCTTCT21775338CAAGTCCTCCTCTGGTAGCCCAATCGTCGGCCTCCCACAATGTCGAAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCTACCAGAGGAGGACTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTACCAGAGGAGGACTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
2.497 | 2.488 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTACCAGAGGAGGACTTG&k=0&no_gap=0&offset=0&limit=50
2.860 | 0.363 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGTCCTCCTCTGGTAGCC&k=0&no_gap=0&offset=0&limit=8
2.869 | 0.009 | cgi_end;

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