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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-13 07:30:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2490667-2490686
TTAAGTTCCCTAATAGGTTCCTTATGTTCT2490667GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2508012-2508031
TTAAGTTCCCTAATAGGCTCCTTATGTTCT2508012GGCTCGACAATCTCAGGAACTTGGGCTTTGATGTGGAAGGGCTTTCAATT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2537404-2537423
TTAAGTTCCCTAATAAGTTCCTTATGTTCT2537404GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2629151-2629170
TTAAGTTCCCTAATAGGTTCCTTATGTTCT2629151GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2627340-2627359
TTAAGTTCCCTAATAAGTTCCTTATGTTCT2627340GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2710363-2710382
TTAAGTTCCCTAATAAGTTCCTTATGTTCT2710363GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2750315-2750334
TTAAGTTCCCTAATAAGTTCCTTATGTTCT2750315GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2684857-2684876
TTAAGTTCCCTAATAGGTTCCTTATGTTCT2684857GGCTCGACAATCTCAGGAACTTGGCCTTTGATGTGGAAGGGCTTTCAATT
Bradyrhizobium ottawaense strain GAS524 genome assembly, chromosome: I.
LT629693.1:2127474-2127493
AGAGTTTTGAGCCCGAGGCGATCAAGCGCG2127474GGCTCGACAATCTCAGGAACCACAAGGGTCTGCTCGGTAACATTTCCTTC
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38575636-38575655
GAATTGAAAGCCCTTCCACATCAAAGGCTA38575636GTTCCTGAGATTGTCGAGCCAGAACATAAGGAACCTATTAGGGAACTTAA
Berberis vulgaris genome assembly, chromosome: 1.
OY747124.1:48413915-48413934
TCAGTTTGGCGTTGTTCATGGGATCGACTA48413915GTTCCTGAGATTGTCGAGCCTTCAAATGCCTGAGTCGAAGCAATACAACC
Bradyrhizobium lablabi strain MT34 genome assembly, chromosome: I.
LT670845.1:4068077-4068096
GAAGGAAATGTTACCGAGCAGACCCTTGTG4068077GTTCCTGAGATTGTCGAGCCCGCGCTTGATCGCCTCGGGCTCAAAACTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCTCGACAATCTCAGGAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTCGACAATCTCAGGAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.359 | 0.350 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTCGACAATCTCAGGAAC&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCCTGAGATTGTCGAGCC&k=0&no_gap=0&offset=0&limit=41
0.473 | 0.002 | cgi_end;

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