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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 07:23:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: AHGS42M18.
DH961685.1:197-216
GAGACAACTTGAGATTAGTGAAAAGAGAAA197GGCTGAGAGAGAACTTGGGATTAATGAACATTGGTTAGCAAATGGCTTAG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:22829735-22829754
GAGACAACTTGAGATTAGTGAAAAGAGAAA22829735GGCTGAGAGAGAACTTGGGATTAATGAACATTGGTTAGCAAATGGCTTAG
Crossocerus cetratus genome assembly, chromosome: 4.
OY776665.1:17384989-17385008
GGAGCGAAGGTGTCCTGAGGGAGTCCAGTT17384989GGCTGAGAGAGAACTTGGGAATGCAGGATAGCATAAGGAACGGTAGAGTT
Sylvilagus floridanus genome assembly, chromosome: 12.
OX463234.1:10214549-10214568
ACCCGCATAACCAGAGTGAGACGCATTCTA10214549TCCCAAGTTCTCTCTCAGCCCTCACTTACTGGCCGTGGGCATTTGGCCTT
Sylvilagus floridanus genome assembly, chromosome: 12.
OX463234.1:15408738-15408757
ACCCGCATAACCAGAGTGAGACTCATTCTA15408738TCCCAAGTTCTCTCTCAGCCCTCACTTACTGGCCATGGCCATTTGGGCTT
Arachis hypogaea DNA, clone: KIAC06J15.
DH965140.1:565-584
CTAAGCCATTTGCTAACCAATGTTCATTAA565TCCCAAGTTCTCTCTCAGCCTTTCTCTTTTCACTAATCTCAAGTTGTCTC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:27065911-27065930
CTAAGCCCTTCGTTAACTAATGTTCACTAA27065911TCCCAAGTTCTCTCTCAGCCTTTCTCCTTTCACTAATCTCAAGTTTTCTC
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:33662151-33662170
CTAAGCCCTTCGTTAACTAATGTTCACTAA33662151TCCCAAGTTCTCTCTCAGCCTTTCTCCTTTCACTAATCTCAAGTTTTCTC
Aphrophora alni genome assembly, chromosome: 1.
OY740766.1:32319491-32319510
CTCTCAGACTAGAGATGTTCCTCTACCTTG32319491TCCCAAGTTCTCTCTCAGCCCAAATGTTGATGACTAACAAAGCCCTTTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCTGAGAGAGAACTTGGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTGAGAGAGAACTTGGGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.324 | 0.315 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTGAGAGAGAACTTGGGA&k=0&no_gap=0&offset=0&limit=50
0.443 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=TCCCAAGTTCTCTCTCAGCC&k=0&no_gap=0&offset=0&limit=47
0.447 | 0.004 | cgi_end;

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