GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 09:11:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Geotrypetes seraphini genome assembly, chromosome: 3.
LR699148.1:185007340-185007359
TTTTCTTCCTTCTATTTTTGTGAATGGCAA185007340GGCTGAGGATGTTGAGAGTTCAGTTAAAATATATGCTTTATAAGAAAATA
Pelobates cultripes genome assembly, chromosome: 03.
OW240914.1:167841551-167841570
AGGAGGGTGGCTTCCCTGTGATCCAGAGTT167841551GGCTGAGGATGTTGAGAGTTAGGTGATTGCTTTCCCAATCTGCCTCTCAC
TSA: Cannabis sativa PK01617.2_1.CasaPuKu mRNA sequence.
JP449482.1:756-775
GGGTTCTGGGGACCGGAGGACGAAGCAGAT756GGCTGAGGATGTTGAGAGTTCGTCACTCTTTTCGATGCAGCCAGGGCTTT
TSA: Cannabis sativa PK01617.1_1.CasaPuKu mRNA sequence.
JP461088.1:933-952
GGGTTCTGGGGACCGGAGGACGAAGCAGAT933GGCTGAGGATGTTGAGAGTTCGTCACTCTTTTCGATGCAGCCAGGGCTTT
Pelobates cultripes genome assembly, chromosome: 06.
OW240917.1:55437477-55437496
AAAAGGCAGGAGAGCAAGCTGCAAGAGCCT55437477AACTCTCAACATCCTCAGCCTGCAGACTGGACTTTAGGGAAGCCACCCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCTGAGGATGTTGAGAGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTGAGGATGTTGAGAGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.129 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTGAGGATGTTGAGAGTT&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=AACTCTCAACATCCTCAGCC&k=0&no_gap=0&offset=0&limit=46
0.164 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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