GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:16:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Plecotus auritus genome assembly, chromosome: X.
OY734031.1:33959011-33959029
TGCAAACTGACCCTCACGTCCTCACAAGAT33959011GGCTGCCTACTTGCCTACTACCAGGCTGGCAGGGGAGTTAGTGAGGGAT
Zootoca vivipara genome assembly, chromosome: 15.
OY735917.1:34076415-34076433
ATTGCAAACTGAATGGACAGTAGAAGCTGT34076415GGCTGCCTACTTGCCTACTGTGGCGAAAGATTTCAAGAGCCTATGTGTG
Rattus norvegicus clone CH230-117P2, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC130977.5:241798-241816
ATTGGTCTCTTCAACCGAAGACACCGTGCA241798GGCTGCCTACTTGCCTACTTCCGTCCCTTGAACCAAGGCAAAGAGAACG
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:25619936-25619954
TCATTATTGGTCCTCGCTTGCAAACAATGT25619936GGCTGCCTACTTGCCTACTTATCATTTTCGTTTCGTTTACTTCAAAACC
Bombus campestris genome assembly, chromosome: 10.
HG995135.1:3421050-3421068
ATTATTATAAAACGACCAGGCAATATCTCC3421050GGCTGCCTACTTGCCTACTTACAGGATGCCGACGATGGCTGTTGTGTTT
Bombus hortorum genome assembly, chromosome: 15.
HG995202.1:3414177-3414195
ATTATTATAAAACGACCAGGCAATATCTCC3414177GGCTGCCTACTTGCCTACTTACAGGATGCCGACGATGGCTGTTGTATTT
Bombus hypnorum genome assembly, chromosome: 4.
OU427023.1:16762706-16762724
ATTATTATAAAACGACCAGGCAATATCTCC16762706GGCTGCCTACTTGCCTACTTACAGGATGCCGACGATGGCTGTTGTGTTT
Bombus pratorum genome assembly, chromosome: 14.
OV883996.1:4674231-4674249
ATTATTATAAAACGACCAGGCAATATCTCC4674231GGCTGCCTACTTGCCTACTTACAGGATGCCGACGATGGCTGTTGTGTTT
Tiliacea aurago genome assembly, chromosome: 15.
OX402591.1:7908689-7908707
CCCTCCCCCCCCCCCCCTTGTTCAAACTCC7908689GGCTGCCTACTTGCCTACTTGACATCCTAACAACGCGCCAACAAGGCCC
Rattus norvegicus chromosome 18 clone CH230-182B6, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC103544.7:181886-181904
CGTTCTCTTTGCCTTGGTTCAAGGGACGGA181886AGTAGGCAAGTAGGCAGCCTGCACGGTGTCTTCGGTTGAAGAGACCAAT
Rattus norvegicus chromosome 18 clone CH230-234J12, WORKING DRAFT SEQUENCE.
AC105615.3:128471-128489
CGTTCTCTTTGCCTTGGTTCAAGGGACGGA128471AGTAGGCAAGTAGGCAGCCTGCACGGTGTCTTCGGTTGAAGAGACCAAT
Bombus pascuorum genome assembly, chromosome: 11.
HG995278.1:9899035-9899053
AAACACAACAGCCATCGTCGGCATCGTGTA9899035AGTAGGCAAGTAGGCAGCCGGAGATATTGCCTGGTCGTTTTATAATAAT
Bombus terrestris genome assembly, chromosome: 15.
OU342935.1:7919303-7919321
AAACACAACAGCCATCGTCGGCATCCTGTA7919303AGTAGGCAAGTAGGCAGCCGGAGATATTGCCTGGTCGTTTTATAATAAT
Bombus sylvestris genome assembly, chromosome: 14.
OU443153.1:2205256-2205274
AAACACAACAGCCATCCTCGGCATTCTGTA2205256AGTAGGCAAGTAGGCAGCCGGAGATATTGCCTGGTCGTTTTATAATAAT
Diabrotica virgifera virgifera genome assembly, chromosome: 2.
OU830625.2:34401095-34401113
AGTAGAGAAGAAGTGTTGAGTTTAAGTTTA34401095AGTAGGCAAGTAGGCAGCCTACTTAAACTTAAACTCAACACTTCTTCTC
Platycnemis pennipes genome assembly, chromosome: 9.
OW121855.1:37679595-37679613
ACACACCCATAGGCACACAATTCACATCCA37679595AGTAGGCAAGTAGGCAGCCTTCAAAACTAACATTCTGCTTCAAAATATT
Dryobota labecula genome assembly, chromosome: 8.
OX383291.1:14287820-14287838
AAAATATTGGTAAACTTTTTATTTGATCTG14287820AGTAGGCAAGTAGGCAGCCTAAAGCCCAGTATTTACCTATAGGACCAGG
Conomelus anceps genome assembly, chromosome: 4.
OX418219.1:49455396-49455414
AGCCATAACTTACTACGTCGATTCCCGAAA49455396AGTAGGCAAGTAGGCAGCCGCTATACGCGGACTGAGAGAGCTATTTATC
Octopus vulgaris genome assembly, chromosome: 15.
OX597828.1:55562440-55562458
CATGTAGGCATCTTGCCAGGCAAGTAGGCA55562440AGTAGGCAAGTAGGCAGCCAGGCAATTAGACGAACAACAGCAAATTGGC
Aporrectodea icterica genome assembly, chromosome: 7.
OY744608.1:43923975-43923993
TCGGCTAATGACAACTCCACCTCGCACTCC43923975AGTAGGCAAGTAGGCAGCCGTGTTTTTGCTTGCACGGATGCAGTCTATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCTGCCTACTTGCCTACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTGCCTACTTGCCTACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.127 | 0.119 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTGCCTACTTGCCTACT&k=0&no_gap=0&offset=0&limit=50
0.197 | 0.070 | search_minus_done; http://172.18.8.135:50400/match?q=AGTAGGCAAGTAGGCAGCC&k=0&no_gap=0&offset=0&limit=41
0.204 | 0.007 | cgi_end;

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