GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:32:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

ICPL20102_CW38_G03 Fusarium wilt challenged (6 DAI) pigeonpea genotype ICPL20102 root cDNA library Cajanus cajan cDNA clone ICPL20102_CW38_G03 5', mRNA sequence.
GR464289.1:126-147
CACAGAAACATTACCTACCCATCCTTTGCA126GGCTTATAGGAACAACAAGAAGCCCATATTGATTTTCATTCAAGCATTGATA
TSA: Cajanus cajan cultivar UPAS 120 contig23180.UPAS mRNA sequence.
EZ640897.1:983-1004
TATCAATGCTTGAATGAAAATCAATATGGG983CTTCTTGTTGTTCCTATAAGCCTGCAAAGGATGGGTAGGTAATGTTTCTGTG
TSA: Cajanus cajan cultivar Asha contig11709.Asha mRNA sequence.
EZ659573.1:401-422
TATCAATGCTTGAATGAAAATCAATATGGG401CTTCTTGTTGTTCCTATAAGCCTGCAAAGGATGGGTAGGTAATGTTTCTGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCTTATAGGAACAACAAGAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTTATAGGAACAACAAGAAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.196 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTTATAGGAACAACAAGAAG&k=0&no_gap=0&offset=0&limit=50
0.225 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCTTGTTGTTCCTATAAGCC&k=0&no_gap=0&offset=0&limit=49
0.226 | 0.001 | cgi_end;

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