GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:20:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cenchrus purpureus cultivar elephant grass chromosome A5.
CP053458.1:21332454-21332473
TTCGCCGCCGACACCCTCCGGGATACCGAT21332454GGCTTTCTTGATGTCGGCGAGCCGCTCCTGGGCCTCGGCGGGCGATTCGG
Hordeum bulbosum genome assembly, chromosome: 2H_1.
OY737490.1:476163482-476163501
GAGAGCCATCGAAAAACGATGTCGGAAATT476163482GGCTTTCTTGATGTCGGCGACGGCTAGGGTTTATGGCTGCTAGCCAAACC
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737511.1:467199263-467199282
GAGAGCCATCAAAAAATGATGTCGGAAATT467199263GGCTTTCTTGATGTCGGCGACGGCTAGGGTTTGTGGCTGCTAGCCAAACC
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737655.1:481819829-481819848
GAGAGCCATCAAAAAATGATGTCGGAAATT481819829GGCTTTCTTGATGTCGGCGACGGCTAGGGTTTGTGGCTGCTAGCCAAACC
Paenibacillus sp. B01 chromosome, complete genome.
CP045802.1:5469761-5469780
CGTGCCCATCAGGCCGACCTTGAGCACGCC5469761GGCTTTCTTGATGTCGGCGAGCTGGCCGCCCTCTGCGGCCGGCTGCTCCG
Paenibacillus albicereus strain UniB2 chromosome, complete genome.
CP051428.1:4916303-4916322
CGTTCCCATCAGGCCGACCTTGAGCACGCC4916303GGCTTTCTTGATGTCGGCGAGCAGGCCGCCATCGGCAGCCGGCTGCTCCG
Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:44694411-44694430
GAGTTCCTCATGAAAAACCACCATTCACTA44694411TCGCCGACATCAAGAAAGCCATTCCACCTCACTGTTTCGAGCGCTCGCTA
Daucus carota isolate Kuroda chromosome 4.
CP125304.1:32983405-32983424
GAGTTCCTCATGAAAAACCACCATTCACTA32983405TCGCCGACATCAAGAAAGCCATTCCACCTCACTGTTTCGAGCGCTCGCTA
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737662.1:469187836-469187855
GGTTTGGCTAGCAGCCATAAACCCTAGCCG469187836TCGCCGACATCAAGAAAGCCAATTTCCGACATCGTTTTTCGATGGCTCTC
Triticum monococcum genome assembly, chromosome: 2A.
OY737859.1:51720098-51720117
CCAGGCGCGACGTGGAGCTTACCATGAAGC51720098TCGCCGACATCAAGAAAGCCCAGGAGGCAGCAAAGAACTCGGCCGAGGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCTTTCTTGATGTCGGCGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTTTCTTGATGTCGGCGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTTTCTTGATGTCGGCGA&k=0&no_gap=0&offset=0&limit=50
0.118 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=TCGCCGACATCAAGAAAGCC&k=0&no_gap=0&offset=0&limit=44
0.121 | 0.003 | cgi_end;

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