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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 23:58:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bos taurus genome assembly, chromosome: 6.
LR962889.1:5631988-5632007
CCAGATTTCTTACTGTTAGCGGCTATCTAA5631988GGCTTTTGAAAGAGATCCAGTCTTTTCTGGAAAATGTCCAAGGATGGATT
Cervus elaphus genome assembly, chromosome: 6.
OU343083.1:5575008-5575027
CCAGATTTCTTACTGTTAGGGGCTATTTAA5575008GGCTTTTGAAAGAGATCCAGTCTTTTCTGGAAAATGTCCAAGGATGGATT
Muntiacus reevesi genome assembly, chromosome: 22.
OZ005646.1:5449342-5449361
CCAGATTTCTTACTGTTAGGGGCTATTTAA5449342GGCTTTTGAAAGAGATCCAGTCTTTTCTGGAAAATGTCCAAGGATGGATT
Bos taurus clone CH240-173G11, WORKING DRAFT SEQUENCE, 22 unordered pieces.
AC165860.2:194339-194358
CCAGATTTCTTACTGTTAGCGGCTATCTAA194339GGCTTTTGAAAGAGATCCAGTCTTTTCTGGAAAATGTCCAAGGATGGATT
Bos mutus isolate yakQH1 chromosome 6.
CP027074.1:100944249-100944268
AATCCATCCTTGGACATTTTCCAGAAAAGA100944249CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Bos taurus genome assembly, chromosome: 6.
LR962764.1:112805148-112805167
AATCCATCCTTGGACATTTTCCAGAAAAGA112805148CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Bos gaurus x Bos taurus genome assembly, chromosome: 6.
OX258960.1:113053572-113053591
AATCCGTCCTTGGACATTTTCCAGAAAAGA113053572CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Bos taurus strain mammals genome assembly, chromosome: 6.
OX344695.1:113118331-113118350
AATCCATCCTTGGACATTTTCCAGAAAAGA113118331CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 32.
OX459968.2:43443586-43443605
AATCCATCCTTGGACATTTTCCAGAAAAGA43443586CTGGATCTCTTTCAAAAGCCTTAAATAGCCCCTAACAGTAAGAAATCTGG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 30.
OX596114.1:44599585-44599604
AATCCATCCTTGGACATTTTCCAGAAAAGA44599585CTGGATCTCTTTCAAAAGCCTTAAATAGCCCCTAACAGTAAGAAATCTGG
Bos taurus genome assembly, chromosome: Bta06.
OY997234.1:113107169-113107188
AATCCATCCTTGGACATTTTCCAGAAAAGA113107169CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 7468248.
GP106631.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 7511127.
GP393456.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 7709206.
GX227333.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 8026064.
GY413363.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from Patent WO2009089296.
HB534546.1:574-593
AATCCATCCTTGGACATTTTCCAGAAAAGA574CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 8450064.
HJ151910.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 8669056.
HJ770604.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 9206478.
HL420201.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 9410202.
KH096856.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 9982311.
MI785379.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 10190167.
MM651714.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Sequence 40188 from patent US 11053547.
MX967712.1:573-592
AATCCATCCTTGGACATTTTCCAGAAAAGA573CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
RPCI42_142N19.TJ RPCI-42 Bos taurus genomic clone RPCI42_142N19, genomic survey sequence.
CW904408.1:393-412
AATCCATCCTTGGACATTTTCCAGAAAAGA393CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Bos taurus clone CH240-173G11, WORKING DRAFT SEQUENCE, 22 unordered pieces.
AC165860.2:71877-71896
AATCCATCCTTGGACATTTTCCAGAAAAGA71877CTGGATCTCTTTCAAAAGCCTTAGATAGCCGCTAACAGTAAGAAATCTGG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT10A13, TM1417.
AP010622.1:4937-4956
ATCAAAATAGCCTAATAGAAAACATACATT4937CTGGATCTCTTTCAAAAGCCACTCTTGCCGAATTGCACAGTTGAACTCAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:59937393-59937412
ATCAAAATAGCCTAATAGAAAACATACATT59937393CTGGATCTCTTTCAAAAGCCACTCTTGCCGAATTGCACAGTTGAACTCAA
Thereva unica genome assembly, chromosome: 1.
OX465281.1:40507944-40507963
TTCCAATAGCTTTGAGTTTAGCTAACAAGG40507944CTGGATCTCTTTCAAAAGCCTTGGAGATATCCAAAGCAGCCAAACTAGAT
Salticus scenicus genome assembly, chromosome: 4.
OZ005651.1:221145949-221145968
CCAAGTACCTCCTATATTCGTTAAGAAGCT221145949CTGGATCTCTTTCAAAAGCCAGATAAAAAGCTACAAAAATTTATATTTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCTTTTGAAAGAGATCCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTTTTGAAAGAGATCCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.187 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTTTTGAAAGAGATCCAG&k=0&no_gap=0&offset=0&limit=50
0.670 | 0.482 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGATCTCTTTCAAAAGCC&k=0&no_gap=0&offset=0&limit=46
0.686 | 0.017 | cgi_end;

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