GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:31:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:45153025-45153045
CTCGCCAAATAACACAAGAACAACAACCAT45153025GGCTTTTGGAGAATGGTGATCCAAAACGCTTGACCAAGGAAGCAAGACATG
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:13291952-13291972
CATGTCTTGCTTCCTTGGTCAAGCGCTTCT13291952GATCACCATTCTCCAAAAGCCATGGTTGTTCTTGTGTTATTTGGCGAGAAG
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:14433685-14433705
CATGTCTTGCTTCCTTGGTCAAGCGCTTTG14433685GATCACCATTCTCCAAAAGCCATGGTTGTTCTTGTGTTATTTGGCGAGAAG
Trifolium fragiferum genome assembly, chromosome: 5.
OX940793.1:17259387-17259407
CATGTCTTGCTTCCTTGGTCAAGCGCTTTG17259387GATCACCATTCTCCAAAAGCCATGGTTGTTCTTGTGTTATTTGGCGAGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGCTTTTGGAGAATGGTGATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCTTTTGGAGAATGGTGATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=GGCTTTTGGAGAATGGTGATC&k=0&no_gap=0&offset=0&limit=50
0.239 | 0.081 | search_minus_done; http://172.18.8.135:50400/match?q=GATCACCATTCTCCAAAAGCC&k=0&no_gap=0&offset=0&limit=49
0.241 | 0.002 | cgi_end;

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