GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-28 11:28:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 624 from patent US 9040774.
HK726329.1:882-905
GTTGTAGGAATTTGTGGGATGGGTGGAATA882GGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGAT
Sequence 624 from Patent EP2304030.
JA867059.1:882-905
GTTGTAGGAATTTGTGGGATGGGTGGAATA882GGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGAT
NF109F07ST1F1062 Developing stem Medicago truncatula cDNA clone NF109F07ST 5', mRNA sequence.
AW696680.2:128-151
GTTGTAGGAATTTGTGGGATGGGTGGAATA128GGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGAT
Medicago truncatula clone mth2-151a7, WORKING DRAFT SEQUENCE.
AC202319.9:98007-98030
GTTGTAGGAATTTGTGGGATGGGTGGAATA98007GGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGAT
Medicago truncatula clone mth2-5p10, complete sequence.
AC144502.5:788-811
GTTGTAGGAATTTGTGGGATGGGTGGAATA788GGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGAT
Medicago truncatula clone mth2-18p3 map mtgsp_014c01, complete sequence.
AC174282.23:74511-74534
GTTGTAGGAATTTGTGGGATGGGTGGAATA74511GGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGAT
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:17036607-17036630
GTTGTAGGGATTTGTGGAATGGGCGGAATA17036607GGGAAGACAACTCTGGCTACTGCTTTGTATGCTAGAATCTCTAATCAATTTGAT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:17925600-17925623
GTTGTAGGGATTTGTGGAATGGGCGGAATA17925600GGGAAGACAACTCTGGCTACTGCTTTGTATGCTAGAATCTCTAATCAATTTGAT
T221058b Medicago truncatula BAC library Medicago truncatula genomic clone 11N17, genomic survey sequence.
AZ757879.1:395-418
ATCAAATTGATGAGAGATTTGACCATATAA395AGCAGTAGCCAGAGTTGTCTTCCCTATTCCACCCATCCCACAAATTCCTACAAC
Medicago truncatula clone mth2-71d8, complete sequence.
AC174294.14:132775-132798
ATCAAATTGATGAGAGATTTGACCATATAA132775AGCAGTAGCCAGAGTTGTCTTCCCTATTCCACCCATCCCACAAATTCCTACAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGAAGACAACTCTGGCTACTGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGAAGACAACTCTGGCTACTGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.170 | 0.161 | search_plus_done; http://172.18.8.135:50400/match?q=GGGAAGACAACTCTGGCTACTGCT&k=0&no_gap=0&offset=0&limit=50
0.199 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=AGCAGTAGCCAGAGTTGTCTTCCC&k=0&no_gap=0&offset=0&limit=42
0.200 | 0.001 | cgi_end;

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