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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-10 10:36:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:57901012-57901031
AAATCAAAATTTCTTTCAATGGATCTATGA57901012GGGACAAAAGAAAATAACGCATAAATTATACTACAGTAAAATTTACATAT
Sepia lycidas genome assembly, chromosome: 21.
OZ010591.1:38232190-38232209
TGATGCTCACAGGACATAACGAAAAAAAGA38232190GGGACAAAAGAAAATAACGCATGATCTAACGAGAAAGCTTGAGTAAATGA
Conger conger genome assembly, chromosome: 11.
OY741324.1:40044400-40044419
GATGGGTAATATTACTCCAATCTCATTTCT40044400GCGTTATTTTCTTTTGTCCCACAAAACACAAATCATTTTTTTTTTTTTTT
Lotus japonicus genomic DNA, chromosome 5, clone: LjT02L13, TM0095c.
AP004936.1:44993-45012
ATATGTAAATTTTACTGTAGTATAATTTAT44993GCGTTATTTTCTTTTGTCCCTCATAGATCCATTGAAAGAAATTTTGATTT
Agriopis marginaria genome assembly, chromosome: 4.
OW029918.1:7311059-7311078
TTTTTGAAGTTTGTTAAAAATAAGCTAGCG7311059GCGTTATTTTCTTTTGTCCCTCTTCGCAATTTCTTGTGCATATTAATTAA
Fragum sueziense genome assembly, chromosome: 9.
OY804600.1:14404439-14404458
TTCGACAAAAGGATACAATGCTGGTTATCA14404439GCGTTATTTTCTTTTGTCCCAATGTTTCCAAAACCCTTTCTATTAGGGAC
Sepia lycidas genome assembly, chromosome: 3.
OZ010573.1:34399516-34399535
CCATTTCCTCAAGCTCTGTAGGCAGTTTAT34399516GCGTTATTTTCTTTTGTCCCTCTTGTATTCAATCTGTCCTGTGAATATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGACAAAAGAAAATAACGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGACAAAAGAAAATAACGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.379 | 0.370 | search_plus_done; http://172.18.8.135:50400/match?q=GGGACAAAAGAAAATAACGC&k=0&no_gap=0&offset=0&limit=50
0.498 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTTATTTTCTTTTGTCCC&k=0&no_gap=0&offset=0&limit=48
0.502 | 0.004 | cgi_end;

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