GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 12:30:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lateolabrax maculatus chromosome Lm15.
CP027276.1:14492858-14492877
GGGAGAGGGAGAGAGCCAGAGAGAGGGAGA14492858GGGAGAGAATCGAGAGGGAGAAGATAGAAAGGGAGAGGGAACGAGAGAGG
Takifugu rubripes genome assembly, chromosome: 21.
LR584233.2:10452972-10452991
GGGAGAGGGAGAGAGCCAGGGAGAGGGAGA10452972GGGAGAGAATCGAGAGGGAGAAGATAGAGAGGGAGCGAGAGAGGGAGCGG
Scyliorhinus canicula genome assembly, chromosome: 1.
LR744030.1:51377749-51377768
TTATATCCATTCGGGCGCACAGGGAGAGGG51377749GGGAGAGAATCGAGAGGGAGAGGCTGGTGGAGGAAATGGCAAGGGTGGAT
Taurulus bubalis genome assembly, chromosome: 8.
OU342718.1:5539927-5539946
GGGAGAGGGAGAGGGCCAGGGAGAGGGAGC5539927GGGAGAGAATCGAGAGGGAGAAGATAGAGAGGGAGAGGGAGCGAGAGAGG
Pleuronectes platessa genome assembly, chromosome: 23.
OX374670.1:2202329-2202348
GAGATGGAGTAAGTGAGAGAAGGATGAGGA2202329GGGAGAGAATCGAGAGGGAGAAGTTTGGAGACAAAGCAGGAGAAGGAGAA
Pleuronectes platessa genome assembly, chromosome: 23.
OX374670.1:2217857-2217876
GAGATGGAGTAAGTGAGAGAAGGATGAGGA2217857GGGAGAGAATCGAGAGGGAGAAGTTTGGAGACAAAGCAGGAGAAGGAGAA
Haliaeetus albicilla genome assembly, chromosome: 20.
OX381657.1:19439371-19439390
TCACTCACTTCCCCCCACCCAGTGGCGTGG19439371GGGAGAGAATCGAGAGGGAGGGGAAAAAAAAAAAAAAATGGTAAAACTCG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_8387.
FX703417.1:2440-2459
TTTGCTTTGAACGCACGTTTTCGTCGGCAG2440GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGAGGGATA
Brassica napus GSS, clone JBnB023C22, end read, primer SACR2(reverse).
FP057861.1:207-226
CTTTGCTTTGAACGCACGTTTTCGTCGGCG207GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGCGATAGA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB014C24, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC189234.2:2470-2489
TTTGCTTTGAACGCACGTTTTCGTCGGCAG2470GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGAGGGATA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A10 clone KBrB064L06, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC234722.1:25934-25953
TTTGCTTTGAACGCACGTTTTCGTCGGCAG25934GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGAGGGATA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH012N11, complete sequence.
AC189588.2:108957-108976
TTGCTTTGAACGCACGTTTTCGTCGGCAGG108957GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGGGATAGA
Brassica rapa genome, scaffold: A05.
LR031570.1:7707766-7707785
TTGCTTTGAACGCACGTTTTCGTCGGCAGG7707766GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGGGATAGA
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:3463298-3463317
CTTTGCTTTGAACGCACGTTTTCGTCGGCG3463298GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGCGATAGA
Triticum aestivum genome assembly, chromosome: 4A.
LR862517.1:425932657-425932676
TGCTAGAGGGAGAGGAGAGGTAGCGAACGA425932657GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGGCATCATCATGA
Triticum aestivum genome assembly, chromosome: 5A.
LR862520.1:212206533-212206552
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA212206533GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR862523.1:163482067-163482086
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA163482067GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR862541.1:211939960-211939979
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA211939960GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR862544.1:165048546-165048565
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA165048546GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR862562.1:211671535-211671554
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA211671535GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR862565.1:169406236-169406255
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA169406236GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR865470.1:211749029-211749048
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA211749029GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865473.1:167908455-167908474
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA167908455GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 4A.
LR865488.1:423872451-423872470
TGCTAGAGGGAGAGGAGAGGTAGCGAACGA423872451GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGGCATCATCATGA
Triticum aestivum genome assembly, chromosome: 5A.
LR865491.1:211074169-211074188
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA211074169GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865494.1:138471106-138471125
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA138471106GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR865512.1:213934850-213934869
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA213934850GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865515.1:167846186-167846205
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA167846186GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR865751.1:213522598-213522617
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA213522598GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865754.1:170345768-170345787
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA170345768GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR865772.1:210642740-210642759
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA210642740GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865775.1:166603876-166603895
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA166603876GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
LR877321.1:214185221-214185240
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA214185221GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR877324.1:167791057-167791076
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA167791057GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 4A.
LR878444.1:422256683-422256702
TGCTAGAGGGAGAGGAGAGGTAGCGAACGA422256683GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGGCATCATCATGA
Triticum aestivum genome assembly, chromosome: 5A.
LR878447.1:211056719-211056738
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA211056719GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LR878450.1:170987922-170987941
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA170987922GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Brassica rapa genome assembly, chromosome: A05.
LS974621.2:1793438-1793457
TTGCTTTGAACGCACGTTTTCGTCGGCAGG1793438GGGAGAGAATCGAGAGGGAGATCTGATCACCGACACACAAGGGGGATAGA
Triticum aestivum genome assembly, chromosome: 5A.
LS992092.1:210076006-210076025
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA210076006GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
LS992095.1:168667867-168667886
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA168667867GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum turgidum subsp. durum genome assembly, chromosome: 5A.
LT934119.1:210705506-210705525
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA210705506GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum turgidum subsp. durum genome assembly, chromosome: 6A.
LT934121.1:166701709-166701728
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA166701709GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
OU015733.1:213417456-213417475
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA213417456GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
OU015736.1:173613339-173613358
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA173613339GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
OU343173.1:214497092-214497111
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA214497092GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
OU343174.1:168806778-168806797
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA168806778GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
OU963884.1:210808545-210808564
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA210808545GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum aestivum genome assembly, chromosome: 6A.
OU963887.1:168999169-168999188
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA168999169GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
OV100749.1:213987848-213987867
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA213987848GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGCGGCGCTGCTCTCT
Triticum aestivum genome assembly, chromosome: 6A.
OV100752.1:171075637-171075656
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA171075637GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
OW530322.1:213987848-213987867
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA213987848GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGCGGCGCTGCTCTCT
Triticum aestivum genome assembly, chromosome: 6A.
OW530325.1:171075637-171075656
AGAGAGAGGGAGAGGACAGGTAGCAAGTGA171075637GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Triticum aestivum genome assembly, chromosome: 5A.
OX637237.1:175421524-175421543
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA175421524GGGAGAGAATCGAGAGGGAGAAAGGGGATTGGGAAGAGCGGCGCTGCTCT
Triticum monococcum genome assembly, chromosome: 1A.
OY737850.1:91539209-91539228
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA91539209GGGAGAGAATCGAGAGGGAGAAAGGGGATCAAGCATGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 3A.
OY737852.1:306533890-306533909
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA306533890GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 3A.
OY737852.1:552216528-552216547
AGAGAGACGGAGAGGAGAGGTAGCGAACGA552216528GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTTCTGTCTCG
Triticum monococcum genome assembly, chromosome: 5A.
OY737854.1:228140953-228140972
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA228140953GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGAGGCGCTGCTCT
Triticum monococcum genome assembly, chromosome: 5A.
OY737854.1:228148785-228148804
AGAGAGAGGGAGAGGACAGGTAGCAAACGA228148785GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTGCTGCTCT
Triticum monococcum genome assembly, chromosome: 5A.
OY737854.1:407352871-407352890
AGAGAGAGGGAGAGGAGAGGTAGCAAACGA407352871GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 6A.
OY737855.1:560581357-560581376
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA560581357GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 7A.
OY737856.1:407377780-407377799
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA407377780GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTATCTCG
Triticum monococcum genome assembly, chromosome: 7A.
OY737856.1:407385623-407385642
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA407385623GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:95971679-95971698
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA95971679GGGAGAGAATCGAGAGGGAGAAAGGGGATCAAGCGTGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 5A.
OY737862.1:226167415-226167434
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA226167415GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGCGCTGCTCT
Triticum monococcum genome assembly, chromosome: 5A.
OY737862.1:226175250-226175269
AGAGAGAGGGAGAGGACAGGTAGCAAACGA226175250GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGCGCTGCTCT
Triticum monococcum genome assembly, chromosome: 6A.
OY737863.1:555524099-555524118
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA555524099GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTGTCTCG
Triticum monococcum genome assembly, chromosome: 7A.
OY737864.1:402067390-402067409
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA402067390GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTATCTCG
Triticum monococcum genome assembly, chromosome: 7A.
OY737864.1:402075231-402075250
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA402075231GGGAGAGAATCGAGAGGGAGAAAGGGGATCGAGCGCGGTCTCCTGTCTTG
Triticum timopheevii genome assembly, chromosome: 5At.
OY997269.1:200230815-200230834
AGAGAGAGGGAGAGGAGAGGTAGCGAACGA200230815GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGCGCTGCTTT
Triticum timopheevii genome assembly, chromosome: 6At.
OY997271.1:145756072-145756091
AGAGAGAGGGAGAGGAGAGGTAGCGAGCGA145756072GGGAGAGAATCGAGAGGGAGAAAGGGGATCGGGAAGAGCGGTTCCCTGGC
Oscheius dolichura genome assembly, chromosome: V.
OW051496.1:8628525-8628544
TTGAAATCGAAAGAATTGAACGAATCAAGA8628525GGGAGAGAATCGAGAGGGAGCGAATCGAGTCCCAGAAGAGGAAAGAAGAT
Heteropelma amictum genome assembly, chromosome: 2.
OY390721.1:31440912-31440931
GAAAAAAAGAGAGAGAGAGAGAGCGCGAGT31440912GGGAGAGAATCGAGAGGGAGAAACATGCCTAGGAGCTAGTAGAACGAGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGAGAGAATCGAGAGGGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGAGAGAATCGAGAGGGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.176 | 0.167 | search_plus_done; http://172.18.8.135:50400/match?q=GGGAGAGAATCGAGAGGGAG&k=0&no_gap=0&offset=0&limit=50
0.239 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCCTCTCGATTCTCTCCC&k=0&no_gap=0&offset=0&limit=0
0.239 | 0.000 | cgi_end;

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