GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 06:42:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Micromys minutus genome assembly, chromosome: 1.
OZ004780.1:250006881-250006900
ACAAAATGAAAAATAAATTGAGTTAAAGAA250006881GGGAGAGAGAACGAGAGGCTTTGGATGTTTTATTGTGACTTTATTGAGTT
Meles meles genome assembly, chromosome: 2.
OV277442.1:62856243-62856262
TAGAACAGAAAAAAAATTAAGAAAAAGGCA62856243GGGAGAGAGAACGAGAGGCTAAAAGCCCTGTCTCCATTTAAAAGCCAAAG
AdH1153-CPY2-G15TR AdH1 Arachis duranensis genomic clone AdH1153-CPY2-G15, genomic survey sequence.
FI297810.1:264-283
GTAAAAAGGAAGTGGCATATAGGCCACGGA264GGGAGAGAGAACGAGAGGCTTGGCTCTCTCATCTACAAAACAAAAGAAAA
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:15968253-15968272
AATGAAAGAAAGTGGCGTATAAGCCACGGA15968253GGGAGAGAGAACGAGAGGCTTGCTCTCTCATTTACAAAACAAAAGAAAAA
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:15972973-15972992
AATGAAAGAAAGTGGCGTATAAGCCACGGA15972973GGGAGAGAGAACGAGAGGCTTGCTCTCTCATTTACAAAACAAAAGAAAAA
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:69256541-69256560
AAACAAAGAAAGTGGCATATAAGCCATGGA69256541GGGAGAGAGAACGAGAGGCTTGGCTTTCTCATTTACAAAAAAAAAAAAAA
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:15949688-15949707
AATGAAAGAAAGTGGCGTATAAGCCACGGA15949688GGGAGAGAGAACGAGAGGCTTGCTCTCTCATTTACAAAACAAAAGAAAAA
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:15954408-15954427
AATGAAAGAAAGTGGCGTATAAGCCACGGA15954408GGGAGAGAGAACGAGAGGCTTGCTCTCTCATTTACAAAACAAAAGAAAAA
Avena insularis genome assembly, chromosome: 3D.
OU342347.1:392249110-392249129
TGCGAGGCGGCGACGGGGAGGTGTTGTAGG392249110GGGAGAGAGAACGAGAGGCTGAGGGAGGCCGGCGGCGGTGGAGGTGCTGG
Anopheles aquasalis genome assembly, chromosome: 2.
OX030882.1:49182659-49182678
GGGTGCCAGCAGGATGTGGAAGACGATCAC49182659GGGAGAGAGAACGAGAGGCTACTGCGCGGCTGCAAAAACGGAAGCGAAAT
Muscardinus avellanarius genome assembly, chromosome: 10.
OY726567.1:45349398-45349417
GCGGTCATTGTGTCTCCCTGTCTGCTTCTC45349398AGCCTCTCGTTCTCTCTCCCACCTCTCATTTTCTCTCTCCCTCCCTGTTC
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 10.
CP133511.1:11563837-11563856
GTCAACACAATCACACTGGGACTGGATTAG11563837AGCCTCTCGTTCTCTCTCCCTCCCTCTCTCTCTCTCCCTCTCTCTCTCTC
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 10.
CP133534.1:12126474-12126493
GTCAACACAATCACACTGGGACTGGATTAG12126474AGCCTCTCGTTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTC
Carassius carassius genome assembly, chromosome: 37.
OY720504.1:10899662-10899681
GGCTACGGTAGCCCTTTTGTGCCAGTATTC10899662AGCCTCTCGTTCTCTCTCCCACTGTAGTTCTGCTTCTCGGTCTCTTTCCC
Zootoca vivipara genome assembly, chromosome: 15.
OY735917.1:16058174-16058193
ATACAGCACACACCCATCTCGTCGAACTAC16058174AGCCTCTCGTTCTCTCTCCCCGGATAACTGCCCCAGAATGTCGTTCAGCT
AdH1188-CPY2-N13TR AdH1 Arachis duranensis genomic clone AdH1188-CPY2-N13, genomic survey sequence.
FI316317.1:764-783
TTTTTCTTTTGTTTGTAAATGAGAGAGCCA764AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTA
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:121542979-121542998
TTTTCTTTTGTTTTGTAGATGAGAGAGCCA121542979AGCCTCTCGTTCTCTCTCCCTCCGTGGCCTATATGCCACTTCCTTTTTAC
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:3212386-3212405
TTTTTTCTTTTGTTTGTAGATGAGAGAGCA3212386AGCCTCTCGTTCTCTCTCCCTCCATGGCTTATATGCCACTTTCTTTCATT
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:11106716-11106735
TTTTTCTTTTGTTTGTAAATGAGAGAGCTA11106716AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTGTTT
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:11121964-11121983
TTTTTCTTTTGTTTTTAAAGGAGAGAGCCA11121964AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTGTTT
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:13039608-13039627
TTTTTCTTTTGTTTGTAAATGAGAGAGCCA13039608AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTATTT
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:13044345-13044364
TTTTTCTTTTGTTTGTAAATGAGAGAGCCA13044345AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTGTTT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:31656007-31656026
TTTTTCTTTTGTTTTGTAAATGAGAGAGCA31656007AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATACGCTACTTTCTTTTTAT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:31920527-31920546
TTTTTCTTTTGTTTTGTAAATGAGAGAGCA31920527AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATACGCTACTTTCTTTTTAT
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:89106061-89106080
TTTTTCTTTGTTTTGTAAATGAGAGAGCCA89106061AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTGTTT
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:89110771-89110790
TTTTTCTTTGTTTTGTAAATGAGAAAGCCA89110771AGCCTCTCGTTCTCTCTCCCTCCGTGGCTTATATGCCACTTTCTTTATTT
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:104505283-104505302
TTTTTTTTTTTTTTGTAAATGAGAAAGCCA104505283AGCCTCTCGTTCTCTCTCCCTCCATGGCTTATATGCCACTTTCTTTGTTT
Avena sativa genome assembly, chromosome: 3D.
OU342394.1:379145589-379145608
CCAGCACCTCCACCGCCGCCGGCCTCCCTC379145589AGCCTCTCGTTCTCTCTCCCCCTACAACACCTCCCCGTCGCCGCCTCGCA
Avena sativa genome assembly, chromosome: 17.
OV702295.1:397939956-397939975
CCAGCACCTCCACCGCCGCCGGCCTCCCTC397939956AGCCTCTCGTTCTCTCTCCCCCTACAACACCTCCCCGTCGCCGCCTCGCA
Narthecium ossifragum genome assembly, chromosome: 1.
OY986963.1:26256412-26256431
CCTATCCCCATGTGATCATGCAGTGAGGAA26256412AGCCTCTCGTTCTCTCTCCCTCCGCCCTGCTCACCCCCTCTCATCTCCCA
Sphecodes monilicornis genome assembly, chromosome: 13.
OU565296.1:13483609-13483628
TGGATTTCATCGCGACCATAGGCATCCGCG13483609AGCCTCTCGTTCTCTCTCCCTCTCTCCCCCTCTCCTTTACTCTCTCTCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGAGAGAGAACGAGAGGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGAGAGAGAACGAGAGGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.130 | 0.121 | search_plus_done; http://172.18.8.135:50400/match?q=GGGAGAGAGAACGAGAGGCT&k=0&no_gap=0&offset=0&limit=50
0.240 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=AGCCTCTCGTTCTCTCTCCC&k=0&no_gap=0&offset=0&limit=40
0.254 | 0.014 | cgi_end;

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