GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 11:54:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 6, clone: LjT21P04, TM0140.
AP004961.1:29677-29696
AATTAGTCATGTTGATCGAACCATAGTATT29677GGGATCAAACTAGTGGTGAGCTCGTAGCCGATAAAACCGCTTCGAGAGTT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:50998118-50998137
AATTAGTCATGTTGATCGAACCATAGTATT50998118GGGATCAAACTAGTGGTGAGCTCGTAGCCGATAAAACCGCTTCGAGAGTT
Athalia cordata genome assembly, chromosome: 1.
OZ010625.1:64530583-64530602
AATTCAAGGACATTGCGAATCAGCGATCCA64530583GGGATCAAACTAGTGGTGAGTATCTTTTAATAATTTTTTCGACACTGATT
Lotus japonicus genomic DNA, chromosome 4, clone: LjB21L22, BM1890.
AP010327.1:37180-37199
AACATTTGAAGTTGTTTTAACGGCTACGAG37180CTCACCACTAGTTTGATCCCAATACTTATATATATATATATATATATATA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:60237881-60237900
AACATTTGAAGTTGTTGTAACGGCTACGAG60237881CTCACCACTAGTTTGATCCCAATACTTATATATATATATATATATATATA
Sturmia bella genome assembly, chromosome: 1.
OY759168.1:100817161-100817180
ATCGGGGGGAGGTGGATTTATACCTTTTTT100817161CTCACCACTAGTTTGATCCCTTGTGTTTTTAATCAAAAGCTGGCGTAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGATCAAACTAGTGGTGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGATCAAACTAGTGGTGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=GGGATCAAACTAGTGGTGAG&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=CTCACCACTAGTTTGATCCC&k=0&no_gap=0&offset=0&limit=47
0.138 | 0.002 | cgi_end;

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