GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-29 05:21:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

vsu-ars_007446_LI10Contig_12756 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO782413.1:402-421
GCCGAGGCCCATTTTGGAAGGCTTGGGCTT402GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGCCCACTGGGCC
Vigna angularis mRNA, clone: VES09P22.
HX945856.1:451-470
GCCTAGGCCCATTTTGGAAGGCCTGGGCTT451GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGACCACTGGGCC
Vigna angularis mRNA, clone: VES18C07.
HX948927.1:445-464
GCCTAGGCCCATTTTGGAAGGCCTGGGCTT445GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGACCACTGGGCC
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:47665943-47665962
GCCTAGGCCCATTTTGGAAGGCCTGGGCTT47665943GGGATCGTAGGAGGTGGAATAATCAAGCGGAGCGGAAGGACCACTGGGCC
POD_028_C12 Phaseolus vulgaris pod EST library Phaseolus vulgaris cDNA 5', mRNA sequence.
CV540178.1:31-50
GGCCCAGTGGGCCTTCCGCTCCGCTTGATT31ATTCCACCTCCTACGATCCCAAGCCCAAGTCTTCCAAAATGGGCCTAGGC
454PCS0248290 Scarlet Runner Bean globular-stage suspensor region size-fractionated Phaseolus coccineus cDNA, mRNA sequence.
GD620599.1:25-44
GGGCCGTTCCGCTCCGCTTGTATT25ATTCCACCTCCTACGATCCCAAGCCCAAGTCTTCCAAAATGGGCCTAGGC
Vigna angularis mRNA, clone: VEPS02N22.
HX939521.1:746-765
GGCCCAGTGGTCCTTCCGCTCCGCTTGATT746ATTCCACCTCCTACGATCCCAAGCCCAGGCCTTCCAAAATGGGCCTAGGC
Vigna angularis mRNA, clone: VES06H12.
HX944519.1:557-576
GGCCCAGTGGTCCTTCCGCTCCGCTTGATT557ATTCCACCTCCTACGATCCCAAGCCCAGGCCTTCCAAAATGGGCCTAGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGATCGTAGGAGGTGGAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGATCGTAGGAGGTGGAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.382 | 0.373 | search_plus_done; http://172.18.8.135:50400/match?q=GGGATCGTAGGAGGTGGAAT&k=0&no_gap=0&offset=0&limit=50
0.693 | 0.312 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCCACCTCCTACGATCCC&k=0&no_gap=0&offset=0&limit=46
0.696 | 0.003 | cgi_end;

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