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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-03 14:05:47, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2389534-2389553
ATCAAGGGAGGTCTCCACCACGATCAAACA2389534GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2352719-2352738
ATCAAGGGAGGTCTCCACCATGATCAAACA2352719GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGTCGTCAAGATCCCTCT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2446862-2446881
ATCAAGGGAGGTCTCCACCATGATCAAACA2446862GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGTCGTCAAGATCCCTCT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2551626-2551645
ATCAAGGGAGGTCTCCACCATGATCAAACA2551626GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2339109-2339128
ATCAAGGGAGGTCTCCACCATGATCAAACA2339109GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus coronaria cultivar PI590014 chromosome 9.
CP154766.1:11068174-11068193
ATCGAGGGAGGTCTCCGCCATGACCAAATA11068174GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCATCAAGATCCCTCT
Chaenomeles sinensis isolate sampleA chromosome 03.
CP162366.1:8188845-8188864
ATCGAGGGAGATCTCCACCATGATCAAACA8188845GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTTT
Malus domestica cultivar WA 38 chromosome 11B.
CP165694.1:2353559-2353578
ATCAAGGGAGGTCTCCACCATGATCAAACA2353559GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGTCGTCAAGATCCCTCT
Malus domestica cultivar WA 38 chromosome 11A.
CP165711.1:2331758-2331777
ATCAAGGGAGGTCTCCACCATGATCAAACA2331758GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica cultivar Golden Delicious chromosome 11.
CP168775.1:2514075-2514094
ATCAAGGGAGGTCTCCACCATGATCAAACA2514075GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica cultivar Golden Delicious chromosome 11.
CP168792.1:2404438-2404457
ATCAAGGGAGGTCTCCACCATGATCAAACA2404438GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica cultivar Golden Delicious chromosome 12.
CP168793.1:22932531-22932550
CCCGTAAAAAAAACCCATATCTTTTGACCC22932531GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2511769-2511788
ATCAAGGGAGGTCTCCACCATGATCAAACA2511769GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2504351-2504370
ATCAAGGGAGGTCTCCACCATGATCAAACA2504351GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2560988-2561007
ATCAAGGGAGGTCTCCACCATGATCAAACA2560988GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2595667-2595686
ATCAAGGGAGGTCTCCACCATGATCAAACA2595667GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2560136-2560155
ATCAAGGGAGGTCTCCACCATGATCAAACA2560136GGGCTTCATCTCCAGTCAAACCCTCTCCTTCTCGCCGTCAAGATCCCTCT
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:9117922-9117941
AGAGGGATCTTGACGGCGAGAAGGAGAGGG9117922TTTGACTGGAGATGAAGCCCGGGTCAAAAGATATGGGTTTTTTTTACGGG
Malus domestica cultivar Red Fuji chromosome 11.
CP147803.1:39205083-39205102
AGAGGGATCTTGACGGCGAGAAGGAGAGGG39205083TTTGACTGGAGATGAAGCCCTGTTTGATCATGGTGGAGACCTCCCTTGAT
Malus domestica cultivar Red Fuji chromosome 11.
CP147812.1:38874051-38874070
AGAGGGATCTTGACGGCGAGAAGGAGAGGG38874051TTTGACTGGAGATGAAGCCCTGTTTGATCATGGTGGAGACCTCCCTTGAT
Malus ioensis cultivar PI590015 chromosome 12.
CP154735.1:5231404-5231423
GAGAAGGATCTTGACGGCGAGAATGAGGGG5231404TTTGACTGGAGATGAAGCCCTGTTTGATCATGGCGGAGACCTCCCTCGAT
Malus ioensis cultivar PI590015 chromosome 12.
CP154752.1:5226032-5226051
GAGAAGGATCTTGACGGCGAGAATGAGGGG5226032TTTGACTGGAGATGAAGCCCTGTTTGATCATGGCGGAGACCTCCCTCGAT
Malus coronaria cultivar PI590014 chromosome 12.
CP154769.1:5391267-5391286
GAGAAGGATCTTGACGGCGAGAAGGAGGGG5391267TTTGACTGGAGATGAAGCCCTGTTTGATCATGGCGGAGACCTCCCTCGAT
Malus coronaria cultivar PI590014 chromosome 12.
CP154786.1:5284659-5284678
GAGAAGGATCTTGACGGCGAGAAGGAGGGG5284659TTTGACTGGAGATGAAGCCCTGTTTGATCATGGCGGAGACCTCCCTCGAT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38763979-38763998
AGAGGGATCTTGACGGCGAGAAGGAGAGGG38763979TTTGACTGGAGATGAAGCCCTGTTTGATCATGGTGGAGACCTCCCTTGAT
Plemyria rubiginata genome assembly, chromosome: 6.
OY754911.1:2788163-2788182
TATGATTCACCTGAATAAATACCTTTTGAC2788163TTTGACTGGAGATGAAGCCCAGACTGAGGCCTTAGGGCGGCCTAATAATC
Osmerus eperlanus genome assembly, chromosome: 21.
OY830034.1:5482584-5482603
TCAAAGAGGTGAATTCACGTGTTAATGGGT5482584TTTGACTGGAGATGAAGCCCCCTGAACGCCCTGTGTCCCGCCGCTGTCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGCTTCATCTCCAGTCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGCTTCATCTCCAGTCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.330 | 0.321 | search_plus_done; http://172.18.8.135:50800/match?q=GGGCTTCATCTCCAGTCAAA&k=0&no_gap=0&offset=0&limit=50
0.533 | 0.203 | search_minus_done; http://172.18.8.135:50800/match?q=TTTGACTGGAGATGAAGCCC&k=0&no_gap=0&offset=0&limit=33
0.539 | 0.007 | cgi_end;

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