GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 22:19:32, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo isolate PI 511890 chromosome 11.
CP136111.1:4591839-4591858
ATCCCTCGCTTCCTTTCCTCAAGGTAATTT4591839GGGGAATTTGGCATTTTCTTTTTCTTGTGGATTGGGGAAAATTAGGGAAG
Cucumis melo genomic scaffold, anchoredscaffold00047.
LN681924.1:2196436-2196455
ATCCCTCGCTTCCTTTCCTCAAGGTAATTT2196436GGGGAATTTGGCATTTTCTTTTTCTTGTGGATTGGGGAAAATTAGGGAAG
Zea mays subsp. mays genome assembly, chromosome: 2.
OZ119267.1:232690332-232690351
GTGTCCTTTCCCCTACATTGGACCACATTA232690332GGGGAATTTGGCATTTTCTTCCGTACAGTGCTTCGAACGGTGACATTTTG
Clostridium sp. MB05 chromosome, complete genome.
CP174370.1:1027523-1027542
TTAATGGAAGCAGCAAGAATAGATGGTCTA1027523GGGGAATTTGGCATTTTCTTTAAGATTTATATACCGACAATGAAGTCAAC
Lucinisca nassula genome assembly, chromosome: 15.
OY757024.1:85416291-85416310
ATTTCAAAATTCAGTGTTGGACTTTTTGTC85416291GGGGAATTTGGCATTTTCTTTGTTGTCTCTTCTGCAGCAAGTTCTATCGG
Pelobates cultripes genome assembly, chromosome: 11.
OW240922.1:41880221-41880240
CGTGCCATCTTGCCATCAGATGGTGTACTA41880221GGGGAATTTGGCATTTTCTTTTTTTTTGCAGAACAATAGTATTGTGGTTC
Mobula hypostoma genome assembly, chromosome: 11.
OY992602.1:10225159-10225178
CTTCACAAACCAGTTAAACTTTGGTATGGC10225159GGGGAATTTGGCATTTTCTTAATAATTTCTTCAGTCTGATATCAGGGAAT
Micromys minutus genome assembly, chromosome: 10.
OZ004790.1:55715015-55715034
AATTATTAAAAGAGAGAGAAAAATTCAAAT55715015AAGAAAATGCCAAATTCCCCTTTCTCTGGGTTGTTTTATTTCCAACGGCG
CL__Eb0006H02.f CL__Eb Curcuma longa cDNA clone CL__Eb0006H02 5', mRNA sequence.
DY392112.1:441-460
TCGGGGATTTCGGTCTCGCCCTCCGCGACG441AAGAAAATGCCAAATTCCCCTCGGCTCGCTCGACTCCACCCGCAGGCACG
CL__Eb0007C10.f CL__Eb Curcuma longa cDNA clone CL__Eb0007C10 5', mRNA sequence.
DY392607.1:441-460
TCGGGGATTTCGGTCTCGCCCTCCGCGACG441AAGAAAATGCCAAATTCCCCTCGGCTCGCTCGACTCCACCCGCAGGCACG
Cucumis melo genomic chromosome, chr_11.
LN713265.1:26771857-26771876
CTTCCCTAATTTTCCCCAATCCACAAGAAA26771857AAGAAAATGCCAAATTCCCCAAATTACCTTGAGGAAAGGAAGCGAGGGAT
Veronica verna genome assembly, chromosome: 1.
OZ060453.1:40760282-40760301
ATGATAAGGAGAGGAAAAAAATTGTATCAA40760282AAGAAAATGCCAAATTCCCCAAATGCCTTTATGGATATTCCTCAATGGAG
Scoparia ambigualis genome assembly, chromosome: 12.
OY992513.1:26142806-26142825
TACAAGTATAGAAAACATTACAAGCCACAT26142806AAGAAAATGCCAAATTCCCCATATATTATTTTTCTCTATGATGCCAAACC
Microcaecilia unicolor genome assembly, chromosome: 8.
LR594639.1:189231750-189231769
GGAACCACATGTGCAAGCATACGCTCCAAT189231750AAGAAAATGCCAAATTCCCCCAAATTGACAGTTGATCTGTAATATCTGTG
Pelobates cultripes genome assembly, chromosome: 12.
OW240923.1:42016314-42016333
AAATTAAAACATTTATTTTTCCTCCCATCC42016314AAGAAAATGCCAAATTCCCCCCACCCCCCAAAAAAATTATCAACTCAAAA
Pelobates cultripes genome assembly, chromosome: 12.
OW240923.1:42032104-42032123
AAATTAAAACATTTATTTTTCCTCCCATCC42032104AAGAAAATGCCAAATTCCCCCCACCCCCCAAAAAAATTATCAACTCAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGGAATTTGGCATTTTCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGGAATTTGGCATTTTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.333 | 0.324 | search_plus_done; http://172.18.8.135:50800/match?q=GGGGAATTTGGCATTTTCTT&k=0&no_gap=0&offset=0&limit=50
0.571 | 0.238 | search_minus_done; http://172.18.8.135:50800/match?q=AAGAAAATGCCAAATTCCCC&k=0&no_gap=0&offset=0&limit=43
0.577 | 0.006 | cgi_end;

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