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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 21:03:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 970 from patent US 9920330.
MI474031.1:520-543
CATGATGTGGAGGCTAAGTACTATGCTGAT520GGGGAGGATGCTTATGATATGAGGAAACAGCTGAAGGGGAAGTCTGTTGGTCAT
Sequence 994 from patent US 9920330.
MI474055.1:558-581
CATGATGTGGAGGCCAAATATTATGCGGAT558GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
Sequence 1004 from patent US 9920330.
MI474065.1:533-556
CATGATGTGGAGGCCAAGTACTATGCGGAT533GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
Sequence 1091 from patent US 9920330.
MI474152.1:443-466
CACGATTTGGAGGCCAAATACTACGCTGAT443GGGGAGGATGCTTATGATATGAGGAAGCAGCTTAAGGGAAGGCAGCAGATGCAG
Sequence 1115 from patent US 9920330.
MI474176.1:480-503
CATGATATTGAAGCTAAGTATTATGCTGAT480GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
Sequence 970 from patent US 10253327.
MM824207.1:520-543
CATGATGTGGAGGCTAAGTACTATGCTGAT520GGGGAGGATGCTTATGATATGAGGAAACAGCTGAAGGGGAAGTCTGTTGGTCAT
Sequence 994 from patent US 10253327.
MM824231.1:558-581
CATGATGTGGAGGCCAAATATTATGCGGAT558GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
Sequence 1004 from patent US 10253327.
MM824241.1:533-556
CATGATGTGGAGGCCAAGTACTATGCGGAT533GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
Sequence 1091 from patent US 10253327.
MM824328.1:443-466
CACGATTTGGAGGCCAAATACTACGCTGAT443GGGGAGGATGCTTATGATATGAGGAAGCAGCTTAAGGGAAGGCAGCAGATGCAG
Sequence 1115 from patent US 10253327.
MM824352.1:480-503
CATGATATTGAAGCTAAGTATTATGCTGAT480GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
Sequence 970 from patent US 10815492.
MV826789.1:520-543
CATGATGTGGAGGCTAAGTACTATGCTGAT520GGGGAGGATGCTTATGATATGAGGAAACAGCTGAAGGGGAAGTCTGTTGGTCAT
Sequence 994 from patent US 10815492.
MV826813.1:558-581
CATGATGTGGAGGCCAAATATTATGCGGAT558GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
Sequence 1004 from patent US 10815492.
MV826823.1:533-556
CATGATGTGGAGGCCAAGTACTATGCGGAT533GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
Sequence 1091 from patent US 10815492.
MV826910.1:443-466
CACGATTTGGAGGCCAAATACTACGCTGAT443GGGGAGGATGCTTATGATATGAGGAAGCAGCTTAAGGGAAGGCAGCAGATGCAG
Sequence 1115 from patent US 10815492.
MV826934.1:480-503
CATGATATTGAAGCTAAGTATTATGCTGAT480GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
Sequence 970 from patent US 11326179.
OO166477.1:520-543
CATGATGTGGAGGCTAAGTACTATGCTGAT520GGGGAGGATGCTTATGATATGAGGAAACAGCTGAAGGGGAAGTCTGTTGGTCAT
Sequence 994 from patent US 11326179.
OO166501.1:558-581
CATGATGTGGAGGCCAAATATTATGCGGAT558GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
Sequence 1004 from patent US 11326179.
OO166511.1:533-556
CATGATGTGGAGGCCAAGTACTATGCGGAT533GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
Sequence 1091 from patent US 11326179.
OO166598.1:443-466
CACGATTTGGAGGCCAAATACTACGCTGAT443GGGGAGGATGCTTATGATATGAGGAAGCAGCTTAAGGGAAGGCAGCAGATGCAG
Sequence 1115 from patent US 11326179.
OO166622.1:480-503
CATGATATTGAAGCTAAGTATTATGCTGAT480GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
Sequence 970 from patent US 11365421.
OO291883.1:520-543
CATGATGTGGAGGCTAAGTACTATGCTGAT520GGGGAGGATGCTTATGATATGAGGAAACAGCTGAAGGGGAAGTCTGTTGGTCAT
Sequence 994 from patent US 11365421.
OO291907.1:558-581
CATGATGTGGAGGCCAAATATTATGCGGAT558GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
Sequence 1004 from patent US 11365421.
OO291917.1:533-556
CATGATGTGGAGGCCAAGTACTATGCGGAT533GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
Sequence 1091 from patent US 11365421.
OO292004.1:443-466
CACGATTTGGAGGCCAAATACTACGCTGAT443GGGGAGGATGCTTATGATATGAGGAAGCAGCTTAAGGGAAGGCAGCAGATGCAG
Sequence 1115 from patent US 11365421.
OO292028.1:480-503
CATGATATTGAAGCTAAGTATTATGCTGAT480GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
FS9_B06 Sugar Beet inflorescence cDNA library (subtracted) Beta vulgaris cDNA 5' similar to probable N-acetyltransferase, mRNA sequence.
BI543861.1:457-480
CATGATATTGAAGCTAAGTATTATGCTGAT457GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
EFCP019D03 flower bud Lambda ZapII cDNA Library Phalaenopsis equestris cDNA clone EFCP019D03 5, mRNA sequence.
CB032868.1:125-148
CACGATTTGGAGGCCAAATACTACGCTGAT125GGGGAGGATGCTTATGATATGAGGAAGCANCTTAAGGGAAGGCAGCATATGCAN
EFCP041A03 flower bud Lambda ZapII cDNA Library Phalaenopsis equestris cDNA clone EFCP041A03 5, mRNA sequence.
CB034109.1:400-423
CACGATTTGGAGGCCAAATACTACGCTGAT400GGGGAGGATGCTTATGATATGAGGAAGCAGCTTAAGGGAAGGCAGCAGATGCAG
CGN-60683 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w29m17 5', mRNA sequence.
DV711798.1:476-499
CATGATGTGGAGGCCAAGTACTATGCAGAT476GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
CGN-61849 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30k15 5', mRNA sequence.
DV712722.1:476-499
CATGATGTGGAGGCCAAGTACTATGCAGAT476GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
SF_59-200R Bv_T0 Beta vulgaris subsp. vulgaris cDNA clone SF_59-200 reverse, mRNA sequence.
FG343159.1:468-491
CATGATATTGAAGCTAAGTATTATGCTGAT468GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
TransId-226606 CACATN1 Coffea arabica cDNA clone CACATN1-8B48TV similar to N-acetyltransferase - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GR994403.1:320-343
CATGATGTGGAGGCCAAGTACTATGCGGAT320GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAACATCAGCACC
TransId-204729 CACATN1 Coffea arabica cDNA clone CACATN1-1A88TVE similar to N-acetyltransferase - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT003709.1:527-550
CATGATGTGGAGGCCAAGTACTATGCGGAT527GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAGGGGTAAAAAACATCAGCAC
TransId-285017 CarCTFrHh24FL2 Coffea arabica cDNA clone CarCTFrHh24FL2_13-E11-M13F similar to N-acetyltransferase - Arabidopsis thaliana (Mouse-ear cress), mRNA sequence.
GT021323.1:533-556
CATGATGTGAAGGCCAAGTACTATGCGGAT533GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCATCAC
BasuP4.F11 diesel tree sapling Copaifera officinalis cDNA, mRNA sequence.
GW315774.1:527-550
CATGATGTGGAGGCTAAGTATTATGCTGAT527GGGGAGGATGCTTATGATATGAGGAAGCAGCTCAAGGGGAAGCAACTTCATCAG
ocpggb0_0284_H05.ab1 Sesamum indicum seed ocggb Library Sesamum indicum cDNA 5', mRNA sequence.
JK068787.1:13-36
GGGTATGCGGAT13GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
TSA: Sesamum indicum cultivar Zhongzhi 11 Unigene33139 mRNA sequence.
JL366625.1:313-336
CATGATGTGGAGGCCAAATATTATGCGGAT313GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACC
TSA: Beta vulgaris Locus_24214_Transcript_1/2_Confidence_1.000_Length_942 mRNA sequence.
JP516048.1:515-538
CATGATATTGAAGCTAAGTATTATGCTGAT515GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
TSA: Beta vulgaris Locus_24214_Transcript_2/2_Confidence_1.000_Length_942 mRNA sequence.
JP516049.1:515-538
CATGATATTGAAGCTAAGTATTATGCTGAT515GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
TSA: Sesamum indicum Locus_18491_Transcript_1/2_Confidence_1.000_Length_1332 mRNA sequence.
JP649429.1:460-483
CATGATGTGGAGGCCAAATATTATGCGGAT460GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
SBA029_H02.r Sugar beet BAC library USH20 (Code SBA) Beta vulgaris genomic clone SBA029_H02 3', genomic survey sequence.
ED031042.1:151-174
CATGATATTGAAGCTAAGTATTATGCTGAT151GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
21-L107575-1033-096-I05-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-096-I05 3', genomic survey sequence.
JY355228.1:301-324
CATGATATTGAAGCTAAGTATTATGCTGAT301GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGA
CCES82 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110722.1:476-499
CATGATGTGGAGGCCAAGTACTATGCAGAT476GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGTAAAAAACATCAGCAC
Warburgia ugandensis isolate CL-2023a chromosome 1.
CP141126.1:99388882-99388905
CATGATGTGGAGGCCAAGTATTATGCGGAT99388882GGGGAGGATGCTTATGATATGAGGAAGCAGTTGAAGGGGAAGGAGAAAGCTCAT
Sesamum indicum clone TilSSR_2031 microsatellite sesame_2031 sequence.
KJ030830.1:3-26
AT3GGGGAGGATGCTTATGATATGAGGAAGCAACTCAAGGGTAGGAAGCATCACCAC
Scutellaria galericulata genome assembly, chromosome: 15.
OX335798.1:8638386-8638409
CATGACATGGAAGCAAAATATTATGCTGAT8638386GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGGTAAGAAGCAGCACAAC
Chenopodium album genome assembly, chromosome: 8.
OX419215.1:70783707-70783730
CATGATATTGAGGCTAAGTATTATGCTGAT70783707GGGGAGGATGCTTATGATATGAGGAAGCAATTGAAGGCGAAATCGGGACACGGT
Verbascum thapsus genome assembly, chromosome: 7.
OY770110.1:16848297-16848320
CATGATATCGAGGCAAAATATTACGCAGAT16848297GGGGAGGATGCTTATGATATGAGGAAACAATTGATGGGTAAGCGGCACCACCAT
Verbascum thapsus genome assembly, chromosome: 7.
OY770110.1:16877642-16877665
CATGATATCGAGGCAAAATATTACTCAGAT16877642GGGGAGGATGCTTATGATATGAGGAAACAATTGTAGGGTTTGAAGTTTAGGGTT
TSA: Allium cepa CUDHLF2_16675 mRNA sequence.
JR859493.1:323-346
AGCAGCATGCTGCTTCTCCTTCAGCATCTT323CCTCATATCATAAGCATCCTCCCCATCCGCATAGTACTTCTGCTCCACATCATG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392548.1:6548542-6548565
TCCGTGTCCCGATTTCGCCTTCAATTGCTT6548542CCTCATATCATAAGCATCCTCCCCATCAGCATAATACTTAGCTTCAATATCATG
Scutellaria minor genome assembly, chromosome: 4.
OX940728.1:24917915-24917938
GTTGTGCTGCTTCTTACCCTTCAATTGCTT24917915CCTCATATCATAAGCATCCTCCCCATCAGCATAATATTTTGCTTCCATGTCATG
Erodium maritimum genome assembly, chromosome: 6.
OY997593.1:31797869-31797892
GGCATGACCCTGCTTCCCCTTGAGCTGCTT31797869CCTCATATCATAAGCATCCTCCCCATCAGCATAATACTTGGCCTCAATATCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGGAGGATGCTTATGATATGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGGAGGATGCTTATGATATGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.438 | 2.429 | search_plus_done; http://172.18.8.135:50400/match?q=GGGGAGGATGCTTATGATATGAGG&k=0&no_gap=0&offset=0&limit=50
2.590 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCATATCATAAGCATCCTCCCC&k=0&no_gap=0&offset=0&limit=1
2.593 | 0.003 | cgi_end;

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