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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 21:51:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:411649664-411649683
AACCCTAATAGAATCTTCTTTTGGGGGGGA411649664GGGGCATTTAGGGTTAGGGTTAGTCTACTTGCTCATCATTTCCTTTTTGA
Sarcophilus harrisii genome assembly, chromosome: 2.
LR735555.1:325624864-325624883
TATAAGACTGAACAAGAAGTGCATCATGCA325624864GGGGCATTTAGGGTTAGGGTTAGGTATTGTTGAGACACACAAAAAGGAAT
Sarcophilus harrisii genome assembly, chromosome: 3.
LR735556.1:169894049-169894068
GTGGTCTCATTCAGTTGGAGATCTTGGCCT169894049GGGGCATTTAGGGTTAGGGTCAACACTGGCTCAAACTCCCAGTTAAGTAA
Sarcophilus harrisii genome assembly, chromosome: 4.
LR735557.1:397027-397046
ATTAAGGTTAGGATTTAGGGTTAGGCTTTG397027GGGGCATTTAGGGTTAGGGTTTGGGGACATTTAGGGTTAGGGGGCAGTTA
Macropus eugenii DNA, BAC clone: MEB1-012C09_F, 5'end.
DE849519.1:209-228
GTTAGGGTTAGGCAGAGTCATGCAGTGAGT209GGGGCATTTAGGGTTAGGGTTAAGCAGACAAGGGCCCTTCGGCCCACCTG
Lotus japonicus genomic DNA, chromosome 1, clone: LjB69F06, BM1186.
AP007878.2:18696-18715
GTTGAGGGAATGTCTCGGAAAGAGGCCAAA18696GGGGCATTTAGGGTTAGGGTATTTTTGAGATCAGTATATATATATATATA
Cucumis melo isolate PI 511890 chromosome 5.
CP136110.1:25492962-25492981
TGACGGTTAGTTTTAGATTGAAACTTTTAA25492962GGGGCATTTAGGGTTAGGGTTAGTACTGTGGGCTTAGGTTAGCCCAACCC
Warburgia ugandensis isolate CL-2023a chromosome 2.
CP141127.1:94800108-94800127
AGGAAGATTGAAGGAGGAGAGAAGTTCTCT94800108GGGGCATTTAGGGTTAGGGTTTTTAGGGTTTTGGAGACTGCAAATTCGCG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:168256979-168256998
GAGGAGGGTGACGAGGGAGGGAGGCAGTGG168256979GGGGCATTTAGGGTTAGGGTTCGCAGGGGAGGGTCTCGGCGCACTTGTAG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:168266034-168266053
AGGAGGGTGACGAGGGAGGGAGGCAGTGGG168266034GGGGCATTTAGGGTTAGGGTTCGCAGGGGAGGTTCTCGGCGCACTTGTAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:118878353-118878372
TATATATATATATATACTGATTTCAAAAAT118878353ACCCTAACCCTAAATGCCCCTTTGGCCTCTTTCCGAGACATTCCCTCAAC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 4.
CP125976.1:371231408-371231427
TCTAAAGAAACCCTAAACCTGCTACCCCAA371231408ACCCTAACCCTAAATGCCCCTTCCTACCCAACCTTACCCACTCCCACCTG
Cucumis melo genomic scaffold, anchoredscaffold00105.
LN681843.1:310663-310682
GGGTTGGGCTAACCTAAGCCCACAGTACTA310663ACCCTAACCCTAAATGCCCCTTAAAAGTTTCAATCTAAAACTAACCGTCA
Cucumis melo genomic chromosome, chr_5.
LN713259.1:5205202-5205221
GGGTTGGGCTAACCTAAGCCCACAGTACTA5205202ACCCTAACCCTAAATGCCCCTTAAAAGTTTCAATCTAAAACTAACCGTCA
Avena longiglumis genome assembly, chromosome: 2A.
OU342748.1:329029911-329029930
TCTAAAGAAACCCTAAACCTGCTACCCCAA329029911ACCCTAACCCTAAATGCCCCTTCCTACCCAACCTTACCCACTCCCACCTG
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:318033025-318033044
CTCTGCAGTCTAGGGAGAGGGGGGAGGGTA318033025ACCCTAACCCTAAATGCCCCCCTCCCTGTAGATATAGCACTCGGTACAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGGCATTTAGGGTTAGGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGGCATTTAGGGTTAGGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.395 | 0.386 | search_plus_done; http://172.18.8.135:50400/match?q=GGGGCATTTAGGGTTAGGGT&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCTAACCCTAAATGCCCC&k=0&no_gap=0&offset=0&limit=40
0.529 | 0.004 | cgi_end;

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