GGGenome | Results

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2025-04-05 21:41:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Felis catus Senzu DNA, chromosome: F2, American Shorthair breed.
AP023169.1:14267981-14267999

TGTACCTGGCACTCTCCAAGCCTATTCTTA14267981GGGGCCCATCCATATGCTTTCCTTAATCTGGTCGCCAACTCGTAAATCT

Conger conger genome assembly, chromosome: 11.
OY741324.1:44446465-44446483

TCAGGATCTGACGATGAATGCTTGAATTGA44446465AAGCATATGGATGGGCCCCTGCCAAGGCGCTTGGGAAATGGGATTGTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.104 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=GGGGCCCATCCATATGCTT&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=AAGCATATGGATGGGCCCC&k=0&no_gap=0&offset=0&limit=49
0.137 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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