GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:43:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pipistrellus genome assembly, chromosome: X.
LR862359.1:71852129-71852148
CTATGTATGCCTTGGGGCTCTGGGTGTCTG71852129GGGTCATGTTGGGAGGGATATGGAAGAAGGGCCACCTGCCTGGATGCTAC
Pipistrellus pygmaeus genome assembly, chromosome: X.
OX465306.1:72905139-72905158
CTATGTATGCCTTGGGGCTCTGGGTGTCTG72905139GGGTCATGTTGGGAGGGATATGGAAGAAGGGCCACCTGCCTGGATGCTAC
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:31653181-31653200
ACATTGTTCCTGCAACACGTGTGCTAACAT31653181GGGTCATGTTGGGAGGGATAAGTTTTGCAAGACCAAAATCTGAAATTTTA
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:34015490-34015509
ACATTGTTCCTGCCACACGTGTGCTAACAT34015490GGGTCATGTTGGGAGGGATAAGTTTTGCAAGACCAAAATCTGAAATTTTA
Malus domestica genome assembly, chromosome: 5.
OU696681.1:33530888-33530907
ACATTGTTCCTGCAACACGTGTGCTAACAT33530888GGGTCATGTTGGGAGGGATAAGTTTTGCAAGACCAAAATCTGAAATTTTA
Malus domestica genome assembly, chromosome: 5.
OU744546.1:33153957-33153976
ACATTGTTCCTGCAACACGTGTGCTAACAT33153957GGGTCATGTTGGGAGGGATAAGTTTTGCAAGACCAAAATCTGAAATTTTA
Hypercompe scribonia genome assembly, chromosome: 17.
OX438984.1:19448997-19449016
GGTTCTTTTTCGTGTAATGGAAAGGACCTG19448997GGGTCATGTTGGGAGGGATACATGTGCGCTGGTAGTGAGTACCAGGCTTT
Pipistrellus nathusii genome assembly, chromosome: X.
OY882879.1:68432844-68432863
GTAGCATCCAGGCAGGTGGCCCTTCTTTCA68432844TATCCCTCCCAACATGACCCCAGACACTCAGAGCACCAAGGCATACATAG
TSA: Pyrus x bretschneideri Unigene21162_XinShao mRNA sequence.
JR615309.1:936-955
TAAAATTTCAGATTTTGGTCTTGCAAAACT936TATCCCTCCCAACATGACCCATGTTAGCACACGTGTTGCAGGAACAATAG
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:12202362-12202381
TAAAATTTCAGATTTTGGTCTTGCAAAACT12202362TATCCCTCCCAACATGACCCATGTTAGCACACGTGTTGCAGGAACAATGT
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:12216110-12216129
TAAAATTTCAGATTTTGGTCTTGCAAAACT12216110TATCCCTCCCAACATGACCCATGTTAGCACACGTGTTGCAGGAACAATGT
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:12849343-12849362
TAAAATTTCAGATTTTGGTCTTGCAAAACT12849343TATCCCTCCCAACATGACCCATGTTAGCACACGTGTTGCAGGAACAATGT
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:13395896-13395915
TAAAATTTCAGACTTTGGTCTTGCAAAACT13395896TATCCCTCCCAACATGACCCATGTTAGCACACGTGTTGCAGGAACAATGT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:9815472-9815491
TAAAATTTCAGATTTTGGTCTTGCAAAACT9815472TATCCCTCCCAACATGACCCATGTTAGCACACGTGTTGCAGGAACAATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGGTCATGTTGGGAGGGATA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGTCATGTTGGGAGGGATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.241 | 0.233 | search_plus_done; http://172.18.8.135:50400/match?q=GGGTCATGTTGGGAGGGATA&k=0&no_gap=0&offset=0&limit=50
0.350 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=TATCCCTCCCAACATGACCC&k=0&no_gap=0&offset=0&limit=43
0.355 | 0.005 | cgi_end;

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