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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:00:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:3681098-3681117
AAGATAGAGAATTTCTGGTTTTTGGATCGT3681098GGGTTTTGGAAATTCTTGTACTTATGTTGAAGAATTGTTTTAGTTGTGGA
Xylota segnis genome assembly, chromosome: 3.
OY757238.1:51905344-51905363
ATGGGTTGTGCCCTAGTCTAGCGAGCTTGT51905344GGGTTTTGGAAATTCTTGTAAACTCTCTGCGGCCTGGCACCCATCTCCAC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:37376201-37376220
TCCACAACTAAAATAATAATTCAACAAAAG37376201TACAAGAATTTCCAAAACCCACGATCCAAAAGGCTGAAATCTTCTATCTT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:38758255-38758274
TCCACAACTAAAACAATTCTTCAACAAAAG38758255TACAAGAATTTCCAAAACCCACGATCCAAAAACCAGAAATTCTCTATCTT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:35777837-35777856
TCCACAACTAAAATAATAATTCAACAAAAG35777837TACAAGAATTTCCAAAACCCACGATCCAAAAGGCTGAAATCTTCTATCTT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:26920760-26920779
TCCACAACTAAAATAATAATTCAACAAAAG26920760TACAAGAATTTCCAAAACCCACGATCCAAACTGCAGAAATCTTCTATCTT
Glaciecola amylolytica strain THG-3.7 chromosome, complete genome.
CP034120.1:2573135-2573154
AGAGGCCAATTGGTTTCAGCAACAATCTTC2573135TACAAGAATTTCCAAAACCCGATCGAGCAAAAATCACGCGCGGACGTTGT
Agrilus biguttatus genome assembly, chromosome: 6.
OY998122.1:26963625-26963644
TCTAGTGATTCACATCGAGTAACAGAAAGC26963625TACAAGAATTTCCAAAACCCAAAACTATCCACCAACTTAGAATCTTAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGGTTTTGGAAATTCTTGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGGTTTTGGAAATTCTTGTA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.376 | 0.368 | search_plus_done; http://172.18.8.135:50400/match?q=GGGTTTTGGAAATTCTTGTA&k=0&no_gap=0&offset=0&limit=50
0.474 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=TACAAGAATTTCCAAAACCC&k=0&no_gap=0&offset=0&limit=48
0.478 | 0.004 | cgi_end;

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