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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 06:08:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Sequence 23 from Patent EP2609205.
JB832835.1:590-609
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC590GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Sequence 31 from Patent EP2609205.
JB832843.1:628-647
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC628GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Sequence 149 from Patent EP2609205.
JB832961.1:618-637
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC618GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Sequence 23 from Patent EP2835427.
LP003360.1:590-609
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC590GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Sequence 31 from Patent EP2835427.
LP003368.1:628-647
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC628GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Sequence 149 from Patent EP2835427.
LP003486.1:618-637
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC618GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRCS03_02K09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K09, mRNA sequence.
CF836242.1:614-633
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC614GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRCS03_04M12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04M12, mRNA sequence.
CF837512.1:300-319
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC300GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CGF1004177_A10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DA0001_IIF_A10 5', mRNA sequence.
CK935175.1:628-647
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC628GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAGG
CGF1004741_C08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IF_C08 5', mRNA sequence.
CK940116.1:625-644
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC625GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRCS05_0002B02_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B02, mRNA sequence.
CN185920.1:586-605
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC586GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCA
UCRPT01_0005L11_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0005L11, mRNA sequence.
CV704653.1:618-637
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC618GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAA
UCRPT01_0014A07_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0014A07, mRNA sequence.
CV710191.1:613-632
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC613GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UFPtC01_005 Cold-induced subtractive cDNA library Citrus trifoliata cDNA clone C5 similar to Wound-induced protein (WI12), mRNA sequence.
CX065932.1:406-425
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC406GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
C05065D06SK DroRLeaf1 Citrus clementina cDNA clone C05065D06, mRNA sequence.
CX294991.1:617-636
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC617GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRPT01_5_003_H06_T3 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_003_T3_H06, mRNA sequence.
CX542977.1:613-632
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC613GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRPT01_5_006_E04_T3 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_006_T3_E04, mRNA sequence.
CX543367.1:613-632
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC613GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRPT01_5_008_B02_T3 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_008_T3_B02, mRNA sequence.
CX543627.1:608-627
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC608GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRPT02_13D07_g Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-13D07-H14-1-5.g, mRNA sequence.
CX635703.1:482-501
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC482GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
UCRCP01_012_D09_T7 Swingle citrumelo nematode-challenged root cDNA library - UCRCP01 Citrus x paradisi x Citrus trifoliata cDNA clone UCRCP01_012_T7_D09, mRNA sequence.
CX664787.1:500-519
TTTTTTTTTTCTTTTTTTTCCAACCGGGAC500GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Citrus unshiu mRNA, clone: MWYEE17, 3'-end sequence, expressed in whole fruit.
DC894838.1:131-150
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC131GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Volcani_1_11_A01 Volcani01 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
DN795748.1:464-483
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC464GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
KN0AAI3BF09FM1 AbsDev1 Citrus clementina cDNA 5', mRNA sequence.
DY258776.1:614-633
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC614GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
KN0AAP5YM16FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY262317.1:116-135
GTTTGTGAGAGCAGCGTCTCCAACCGGGAC116GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA22AE08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267682.1:597-616
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC597GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA30AG01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY272079.1:257-276
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC257GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA41DF09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276715.1:429-448
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC429GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA5CD04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY283805.1:603-622
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC603GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA62BF09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY284811.1:614-633
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC614GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA92AD03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY297195.1:613-632
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC613GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
IC0AAA9BF02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY300168.1:613-632
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC613GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
KN0AAQ11YE11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY300785.1:590-609
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC590GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CS00-C3-701-074-C12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY707942.1:613-632
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC613GGTAAATCTGTCCCGGGTTTGGGTCTCGCTCTCTAAGCAAAACAAAAAAG
CS00-C3-702-003-D08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY711067.1:142-161
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC142GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CS00-C3-703-058-F01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
EY723416.1:175-194
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC175GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CS00-C3-703-060-H07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
EY723590.1:175-194
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC175GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CR05-C3-700-096-C05-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY787356.1:642-661
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC642GGTAAATCTGTCCCGGGTTTTGGTTCTCGCTCTCTGAGCAAACCAAAAAG
CR05-C3-701-104-B11-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY801579.1:626-645
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC626GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CR05-C3-701-074-D08-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY801854.1:597-616
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC597GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
PT11-C2-300-037-G11-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY829691.1:141-160
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC141GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
PT11-C2-300-064-E06-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
EY831570.1:400-419
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC400GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
PT11-C9-005-037-A10-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA sequence.
EY841220.1:556-575
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC556GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
PT11-C9-005-039-B07-CT.F Poncirus trifoliata seed, field plant Citrus trifoliata cDNA, mRNA sequence.
EY841393.1:556-575
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC556GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CM30-C1-401-073-A04-CT.F Sweet lime leaf, infected with CiLV Citrus limettioides cDNA, mRNA sequence.
EY865230.1:627-646
TTTGGGAGAACAGCGTCTCCAACCCGGGAC627GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCCCCAACCAAACCAAAAAAA
CL06-C4-501-029-F02-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
EY874735.1:135-154
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC135GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CL06-C4-501-036-G04-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
EY875582.1:123-142
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC123GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CL06-C4-501-052-E08-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
EY876491.1:135-154
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC135GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
CL06-C4-501-075-D10-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
EY878098.1:236-255
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC236GGTAAATCTGTCCCGGGTTTGGTACTCGCTCTCTAAGCAAACCAAAAAAG
TS27-C2-300-039-F04-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence.
EY890745.1:106-125
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC106GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
TS27-C2-300-044-H10-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence.
EY891023.1:92-111
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC92GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
TS27-C2-300-055-C03-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence.
EY891724.1:92-111
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC92GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
KN0AAI3BF09FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BF09, mRNA sequence.
FC873554.1:614-633
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC614GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
C31200H10EF BiotPhyR1 Citrus aurantium cDNA clone C31200H10, mRNA sequence.
FC873965.1:612-631
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC612GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAAGCAACCAAAAAGG
C31203G11EF BiotPhyR1 Citrus aurantium cDNA clone C31203G11, mRNA sequence.
FC874234.1:618-637
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC618GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAAGCAACCAAAAAGG
C31207D08EF BiotPhyR1 Citrus aurantium cDNA clone C31207D08, mRNA sequence.
FC874554.1:284-303
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC284GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
C31405H07EF CTVClemen1 Citrus clementina cDNA clone C31405H07, mRNA sequence.
FC875615.1:618-637
GTTTGGGAGAGCAGCGTCNTCCACCGGGAC618GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAAGCAACCAAAAAGG
Citrus sinensis genome assembly, chromosome: 8.
OY754325.1:27099151-27099170
GTTTGGGAGAGCAGCGTCTCCAACCGGGAC27099151GGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAGCAAACCAAAAAAG
Furfurilactobacillus rossiae strain RS chromosome, complete genome.
CP040576.1:890510-890529
ATGGCCAAAGTTAACCAGTGGGCCACGTGT890510GGTAAATCTGTCCCGGGTTTCCACGCCGTAACGTTGTTGGCAAGTGCCAA
Furfurilactobacillus rossiae strain L1 chromosome, complete genome.
CP040586.1:877583-877602
ATGGCCAAAGTTAACCAGTGGGCCACGTGT877583GGTAAATCTGTCCCGGGTTTCCACGCCGTAACGTTGTTGGCAAGTGCCAA
Furfurilactobacillus rossiae strain LR814 chromosome.
CP045181.1:2626096-2626115
ATGGCCAAAGTTAACCAGTGGGCCACGTGT2626096GGTAAATCTGTCCCGGGTTTCCACGCCGTAACGTTGTTGGCAAGTGCCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTAAATCTGTCCCGGGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTAAATCTGTCCCGGGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.470 | 2.461 | search_plus_done; http://172.18.8.135:50400/match?q=GGTAAATCTGTCCCGGGTTT&k=0&no_gap=0&offset=0&limit=50
2.543 | 0.073 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCCGGGACAGATTTACC&k=0&no_gap=0&offset=0&limit=0
2.543 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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