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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:31:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: AHGS45D04.
DH961618.1:361-380
CTCTACAAAGAGTTCTTCGATTTTGAAAGT361GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:47181575-47181594
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47181575GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:47790690-47790709
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47790690GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:44270869-44270888
CTCTCTCTCTCTCTCCTGCCCTGTGTTTCT44270869ATCTGTCAAGTGCCGCTACCACTTTCAAAATCGAAGAATTTCTAACAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTAGCGGCACTTGACAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTAGCGGCACTTGACAGAT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.191 | 0.183 | search_plus_done; http://172.18.8.135:50400/match?q=GGTAGCGGCACTTGACAGAT&k=0&no_gap=0&offset=0&limit=50
0.282 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTGTCAAGTGCCGCTACC&k=0&no_gap=0&offset=0&limit=47
0.282 | 0.001 | cgi_end;

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