GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-05 02:29:38, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: AHGS45D04.
DH961618.1:361-380
CTCTACAAAGAGTTCTTCGATTTTGAAAGT361GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:47181575-47181594
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47181575GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:47790690-47790709
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47790690GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 13.
CP156100.1:47700911-47700930
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47700911GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis hypogaea cultivar Huayu23 chromosome 03.
CP156110.1:44863006-44863025
TCTTGTTAGAAATTCTTCGATTTTGAAAGT44863006GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Huayu23 chromosome 13.
CP156120.1:48147574-48147593
TCTTGTTAGAAATTCTTCGATTTTGAAAGT48147574GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis hypogaea cultivar Chedouzi chromosome 03.
CP156130.1:44862382-44862401
CTTGTTAGAAATTCTTCGATTTTTGAAAGT44862382GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAGAGAGAGAGAAGAG
Arachis hypogaea cultivar Chedouzi chromosome 13.
CP156140.1:47650221-47650240
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47650221GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis hypogaea cultivar Laiyang Silihong chromosome 03.
CP156150.1:44691456-44691475
TCTTGTTAGAAATTCTTCGATTTTGAAAGT44691456GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Laiyang Silihong chromosome 13.
CP156160.1:47572729-47572748
TCTTGTTAGAAATTCTTCGATTTTGAAAGT47572729GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis ipaensis isolate Y4 chromosome 3.
CP160332.1:48135511-48135530
TCTTGTTAGAAATTCTTCGATTTTGAAAGT48135511GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGAAGAGAGAGAGAAAG
Arachis duranensis isolate Y26 chromosome 03.
CP160342.1:45012591-45012610
TCTTGTTAGCAATTCTTCGATTTTGAAAGT45012591GGTAGCGGCACTTGACAGATAGAAACACAGGGCAGGAGAGAGAGAGAGAG
Halichoerus grypus genome assembly, chromosome: 10.
OZ210069.1:71892309-71892328
CCCTCCCTCCCTCCAGACCTCAATCTTCTC71892309ATCTGTCAAGTGCCGCTACCGGGCTGGAGGATCTCCAAGCCCCTTTCATA
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:44270869-44270888
CTCTCTCTCTCTCTCCTGCCCTGTGTTTCT44270869ATCTGTCAAGTGCCGCTACCACTTTCAAAATCGAAGAATTTCTAACAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTAGCGGCACTTGACAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTAGCGGCACTTGACAGAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.825 | 0.816 | search_plus_done; http://172.18.8.135:50900/match?q=GGTAGCGGCACTTGACAGAT&k=0&no_gap=0&offset=0&limit=50
1.276 | 0.451 | search_minus_done; http://172.18.8.135:50900/match?q=ATCTGTCAAGTGCCGCTACC&k=0&no_gap=0&offset=0&limit=38
1.277 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).