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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 07:55:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Apteryx australis mantelli genome assembly, scaffold: scaffold36.
LK064612.1:525962-525980
GGAATAGGGTGGTGGTTTGTTGCTGGGAAG525962GGTCGACAGGAAGATGACTTCCCTTTGCAGACAGAGGAGGAAGAAAAGG
Limnoperna fortunei genome assembly, chromosome: 1.
OX104111.1:63970434-63970452
TGTCTATTTGTGGGTGTTGGCCATATACTA63970434GGTCGACAGGAAGATGACTTACTCTCCCAAGCATTAGCATGCTTGGTGA
Meconema thalassinum genome assembly, chromosome: 1_1.
OX336388.2:1281093557-1281093575
GGGGTTGGAAGAGAAGAGTTGATCAAGGAA1281093557GGTCGACAGGAAGATGACTGAGAGGAGTTCGGCACAAGTAAGTTGAAGC
Meconema thalassinum genome assembly, chromosome: 13.
OX336401.1:177667587-177667605
GCTTTCACTTACTTGTGCCGGTGTCCTGTA177667587AGTCATCTTCCTGTCGACCTTCCTTGACCAATTCCTTTTCTCATCCGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTCGACAGGAAGATGACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTCGACAGGAAGATGACT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.355 | 0.346 | search_plus_done; http://172.18.8.135:50400/match?q=GGTCGACAGGAAGATGACT&k=0&no_gap=0&offset=0&limit=50
0.449 | 0.094 | search_minus_done; http://172.18.8.135:50400/match?q=AGTCATCTTCCTGTCGACC&k=0&no_gap=0&offset=0&limit=47
0.450 | 0.001 | cgi_end;

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