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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 02:19:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:9550030-9550049
TTGTCGTCTTCTTCATCATCGTCCAATGAG9550030GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:8917497-8917516
TGAGTATCAAACTCATTGTCGTTCGATGAG8917497GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTGTTTCCTTATTCTTCTTCGA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:9612474-9612493
TTGTCGTCTTCTTCATCATCGTCCAATGAG9612474GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:8853998-8854017
TTGTCGTCTTCTTCATCATCGTCCGATGAG8853998GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:9018069-9018088
TTGTCGTCTTCTTCATCATTGTCCGATGAG9018069GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:9012052-9012071
TTGTCGTCTTCTTCATCATCGTCCGATGAG9012052GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:9651283-9651302
TTGTCGTCTTCTTCATCATCGTCCAATGAG9651283GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:9540796-9540815
TTGTCGTCTTCTTCATCATCGTCCAATGAG9540796GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:9479603-9479622
TTGTCGTCTTCTTCATCATCGTCCGATGAG9479603GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:9415037-9415056
TTGTCGTCTTCTTCATCATCGTCCAATGAG9415037GGTGAGTCTTCCTCCTTCTTTGTTTTTCCTCTTTCCTTATTCTTCTTCGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX460085.1:316725433-316725452
AGAATCGACCTTCGCGCCCACATCCTCTAT316725433GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare genome assembly, chromosome: 4H.
OX460246.1:310223462-310223481
AGAATCGACCTTCGCGCCCACATCCTCTAT310223462GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590737.1:309478569-309478588
AGAATCGACCTTCGCGCCCACATCCTCAAT309478569GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590751.1:313394011-313394030
AGAATCGACCTTCGCGCCCACATCCTCTAT313394011GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638745.1:313408572-313408591
AGAATCGACCTTCGCGCCCACATCCTCTAT313408572GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638780.1:317037224-317037243
AGAATCGACCTTCGCGCCCACATCCTCTAT317037224GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638829.1:318127235-318127254
AGAATCGACCTTCGCGCCCACATCCTCTAT318127235GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638871.1:319865207-319865226
AGAATCGACCTTCGCGCCCACATCCTCTAT319865207GGTGAGTCTTCCTCCTTCTTCAACACGTGCACATTTATCAGCCAAAGCAT
Incurvaria masculella genome assembly, chromosome: 16.
OX335656.1:14049063-14049082
GTTACAGCACCAGACCGCTGCACACGCCCT14049063GGTGAGTCTTCCTCCTTCTTCTATCTTCTTCTTCTCGACTCTCTTCTTCT
Sepioteuthis lessoniana genome assembly, chromosome: 16.
OY757919.1:65580041-65580060
TATTGATGCATCTACGCAATACTCAATGCT65580041GGTGAGTCTTCCTCCTTCTTTTGTTGACACATACAGTATATGTTATTTCT
Arvicola amphibius genome assembly, chromosome: 9.
LR862389.2:73379678-73379697
GAGTTGGTAAAACTTTGGGGTAAAATCTGT73379678AAGAAGGAGGAAGACTCACCTATGTATGTTTGTGTACACATGTAGTCTGA
Chionomys nivalis genome assembly, chromosome: 19.
OX465467.1:13822015-13822034
GAGTTGGTAAAACGTTTGGGTAGAATCTGT13822015AAGAAGGAGGAAGACTCACCTATGTATGTTTGTGTAAACATGGAGTCTGA
Nannobrachium achirus genome assembly, chromosome: 7.
OY997644.1:51738733-51738752
GTTAATTTGTGTCAGTCAAATACACTGGCG51738733AAGAAGGAGGAAGACTCACCCTGCTCCAACGGCGGAGGCTTCACCCCCGT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:32268732-32268751
TCGAAGAAGAATAAGGAAAGAGGAAAAACA32268732AAGAAGGAGGAAGACTCACCCTCATCGGACGATGATGAAGAAGACGACAA
Pollenia angustigena genome assembly, chromosome: 4.
OV884059.1:10532854-10532873
GTAAGGGAACTATGTAGAAGCTGCGGCAAC10532854AAGAAGGAGGAAGACTCACCTGCCTTATAAAAAGTGTTCCATTGTTAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGAGTCTTCCTCCTTCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGAGTCTTCCTCCTTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.349 | 0.340 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGAGTCTTCCTCCTTCTT&k=0&no_gap=0&offset=0&limit=50
0.480 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAAGGAGGAAGACTCACC&k=0&no_gap=0&offset=0&limit=30
0.483 | 0.003 | cgi_end;

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