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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 15:54:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:780392848-780392867
CCTGTTTATTAATCAGTCTGAATATATGCG780392848GGTGCAAAAGAGAGCGAGAGAGCCAGCAAACTACAGAGCTATGCATAGAG
Trachurus trachurus genome assembly, chromosome: 7.
LR991638.1:27925399-27925418
AAAGGAGAGCGTGGTGGAAATGGAAGTAGA27925399GGTGCAAAAGAGAGCGAGAGAGAGAGAAAGTGAAGGATAGAAAAGACACA
Cyprinus carpio genome assembly, scaffold: 000001513.
LN598459.1:1113280-1113299
TACTTTGTGAATGTTTTTCTCTCTCTCTCT1113280CTCTCGCTCTCTTTTGCACCTTATAGGTTTGCCTTTCTTCAATTTCGCTG
UCRCR01_06C18_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa06C18, mRNA sequence.
CF831353.1:103-122
CCTTCTAACTTTTTCAAGTCTCAATGGATT103CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
UCRCS03_05J16_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05J16, mRNA sequence.
CF838022.1:145-164
CCTTCTAACTTTTTCAAGTCTCAATGGATT145CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
UCRCS03_05N05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05N05, mRNA sequence.
CF838148.1:122-141
CCTTCTAACTTTTTCAAGTCTCAATGGATT122CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
UCRCS03_06I15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I15, mRNA sequence.
CF838423.1:143-162
CCTTCTAACTTTTTCAAGTCTCAATGGATT143CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
UCRCS03_06I15_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I15, mRNA sequence.
CF838765.1:144-163
CCTTCTAACTTTTTCAAGTCTCAATGGATT144CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
CGF1004347_F09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_F09 5', mRNA sequence.
CK933092.1:77-96
CCTTCTAACTTTTTCAAGTCTCAATGGATT77CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA100BH02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY262613.1:13-32
TCTCAATGGATT13CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA22AH02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267711.1:131-150
CCTTCTAACTTTTTCAAGTCTCAATGGATT131CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA22BG02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267791.1:131-150
CCTTCTAACTTTTTCAAGTCTCAAAGGATT131CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA33DH02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY273448.1:116-135
CCTTCTAACTTTTTCAAGTCTCAATGGATT116CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA39AD11RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275327.1:129-148
CCTTCTAACTTTTTCAAGTCTCAATGGATT129CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA3AA10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275660.1:118-137
CCTTCTAACTTTTTCAAGTCTCAATGGATT118CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA57BF04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY282678.1:104-123
CCTTCTAACTTTTTCAAGTCTCAATGGATT104CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA63CG02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY285490.1:106-125
CCTTCTAACTTTTTCAAGTCTCAATGGATT106CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA76DE02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY290961.1:116-135
CCTTCTAACTTTTTCAAGTCTCAATGGATT116CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
KN0AAQ11YF13RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY300810.1:125-144
CCTTCTAACTTTTTCAAGTCTCAATGGATT125CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
KN0AAQ4YJ01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY303009.1:199-218
CCTTCTAACTTTTTCAAGTCTCAATGGATT199CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
KN0AAQ6YJ17RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY303719.1:135-154
CCTTCTAACTTTTTCAAGTCTCAATGGATT135CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
CS00-C1-102-077-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY673393.1:131-150
CCTTCTAACTTTTTCAAGTCTCAATGGATT131CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
CS00-C3-701-071-G12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY707720.1:116-135
CCTTCTAACTTTTTCAAGTCTCAATGGATT116CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
CS00-C3-704-001-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY728288.1:145-164
CCTTCTAACTTTTTCAAGTCTCAATGGATT145CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA33DH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33DH02, mRNA sequence.
FC885175.1:116-135
CCTTCTAACTTTTTCAAGTCTCAATGGATT116CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA100BH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA100BH02, mRNA sequence.
FC885925.1:13-32
TCTCAATGGATT13CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA76DE02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA76DE02, mRNA sequence.
FC886100.1:116-135
CCTTCTAACTTTTTCAAGTCTCAATGGATT116CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA39AD11RM2 IVIA1 Citrus clementina cDNA clone IC0AAA39AD11, mRNA sequence.
FC888944.1:129-148
CCTTCTAACTTTTTCAAGTCTCAATGGATT129CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
KN0AAQ4YJ01RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ4YJ01, mRNA sequence.
FC891321.1:199-218
CCTTCTAACTTTTTCAAGTCTCAATGGATT199CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA57BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA57BF04, mRNA sequence.
FC893455.1:104-123
CCTTCTAACTTTTTCAAGTCTCAATGGATT104CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
KN0AAQ11YF13RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ11YF13, mRNA sequence.
FC894869.1:125-144
CCTTCTAACTTTTTCAAGTCTCAATGGATT125CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
KN0AAQ6YJ17RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ6YJ17, mRNA sequence.
FC899472.1:135-154
CCTTCTAACTTTTTCAAGTCTCAATGGATT135CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA22AH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22AH02, mRNA sequence.
FC901431.1:131-150
CCTTCTAACTTTTTCAAGTCTCAATGGATT131CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA22BG02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22BG02, mRNA sequence.
FC906862.1:131-150
CCTTCTAACTTTTTCAAGTCTCAAAGGATT131CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA3AA10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA3AA10, mRNA sequence.
FC907077.1:125-144
CCTTCTAACTTTTTCAAGTCTCAATGGATT125CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
IC0AAA63CG02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA63CG02, mRNA sequence.
FC907441.1:106-125
CCTTCTAACTTTTTCAAGTCTCAATGGATT106CTCTCGCTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGG
Digitaria exilis genome assembly, chromosome: 3B.
LR994609.1:7338527-7338546
CAAATTAAAATGCATGCACTGCTGCACCGG7338527CTCTCGCTCTCTTTTGCACCTGATGGCTGATGCACACCGTACCGTACCAG
Macrobrachium nipponense isolate FS-2020 chromosome 11.
CP062045.1:86070386-86070405
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT86070386CTCTCGCTCTCTTTTGCACCTGCGTCTGTCCATACGCGTCTCTGTCCGCG
Eilema caniola genome assembly, chromosome: 23.
OX421484.1:18790671-18790690
AGGTGAGGTGTAGTTTGTCTCTCTCTCTCT18790671CTCTCGCTCTCTTTTGCACCCCTGCCAAGATTGTAGTGGCCGCTGGTTTT
Agonopterix alstromeriana genome assembly, chromosome: 22.
OZ004683.1:12643080-12643099
AGTCAAACAAGGAATCCATTCTGTCTGTCG12643080CTCTCGCTCTCTTTTGCACCGAAATCGAAATTTGGCGTGAAGACAGATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGCAAAAGAGAGCGAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGCAAAAGAGAGCGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGCAAAAGAGAGCGAGAG&k=0&no_gap=0&offset=0&limit=50
1.663 | 1.556 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCGCTCTCTTTTGCACC&k=0&no_gap=0&offset=0&limit=48
1.688 | 0.024 | cgi_end;

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