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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:01:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Psittacula echo genome assembly, chromosome: 3.
OY725422.1:27801883-27801902
GGTTTATTGGCATAGGTATAGCACTGCAGT27801883GGTGCTTTATGCTGCTGTCAGAGCTTGCTCTGCTACATTTACAGTGTTCT
TSA: Musa acuminata AAA Group Unigene8588_NK1 mRNA sequence.
JV446376.1:205-224
CCGAGCTACGTCGGATGAATGGCCTTATGC205GGTGCTTTATGCTGCTGTCAAGCTGCGGTGGCGGGGTGTGGCCGGAAGGA
Musa troglodytarum cultivar karat chromosome 7.
CP097509.1:3210392-3210411
CCGAGCTACGTCGGATGAACGGACTTATGC3210392GGTGCTTTATGCTGCTGTCAGTCTAACAAACACGTCGAGCGCTTTCAGAC
Glycine max cultivar Williams 82 chromosome 6.
CP126431.1:36630268-36630287
CTCCTATGCTGTTGTGGGGCAGGGATCCCA36630268GGTGCTTTATGCTGCTGTCATATCAACTACATAATCCGTGTGTGCAGCGC
Hippopus hippopus genome assembly, chromosome: 1.
OX328096.1:64574163-64574182
AGGGTTAGATTTGCTGGAATTTGTATAAAT64574163GGTGCTTTATGCTGCTGTCAACAATATTTCAGCCACATCACAGCATGGGT
TSA: Musa acuminata AAA Group Unigene58601_B1 mRNA sequence.
JV342340.1:17-36
CCCCGCCACCGCAGCT17TGACAGCAGCATAAAGCACCGCATAAGGCCATTCATCCGACGTAGCTCGG
Seq_sg_23-M02.f MAMB Musa acuminata subsp. malaccensis genomic, genomic survey sequence.
HN251310.1:383-402
CCTTCCAGCCACACCCCCGCCACCGCAGCT383TGACAGCAGCATAAAGCACCGCATAAGGCCATTCATCCGACGTAGCTCGG
Musa acuminata subsp. malaccensis isolate AA chromosome 7.
CP126376.1:36135637-36135656
TCCTTCCGGCCACACCCCGCAACCGCAGCT36135637TGACAGCAGCATAAAGCACCGCATAAGGCCATTCATCCGACGTAGCTCGG
Musa acuminata subsp. malaccensis isolate AA chromosome 18.
CP126387.1:35992358-35992377
TCCTTCCGGCCACACCCCGCAACCGCAGCT35992358TGACAGCAGCATAAAGCACCGCATAAGGCCATTCATCCGACGTAGCTCGG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:37155508-37155527
CCTTCCAGCCACACCCCCGCCACCGCAGCT37155508TGACAGCAGCATAAAGCACCGCATAAGGCCATTCATCCGACGTAGCTCGG
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:40924886-40924905
TCCTTCCGGCCACATCCCGCCACCGCAGCT40924886TGACAGCAGCATAAAGCACCGCATAAGGCCATTCATCCGACGTAGCTCGG
Hippopus hippopus genome assembly, chromosome: 3.
OX328098.1:40373254-40373273
GCTGTTGCTATGATATGACTGAATTAATGT40373254TGACAGCAGCATAAAGCACCATTTTATCAATCAATCAATGCTCAAAGTTA
Tridacna derasa genome assembly, chromosome: 1.
OY723414.1:18103185-18103204
ACCCATGCTGTGATGTGGCTGAAATATTGT18103185TGACAGCAGCATAAAGCACCATTTATACAAATTCCAGCAAATCTAACCCT
Tridacna derasa genome assembly, chromosome: 2.
OY723415.1:40921922-40921941
GCTGTTGCTATGATATGACTGAATTAATGT40921922TGACAGCAGCATAAAGCACCATTTTATCAATCAATCGATGCTCAAAGTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTGCTTTATGCTGCTGTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGCTTTATGCTGCTGTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.204 | 0.196 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGCTTTATGCTGCTGTCA&k=0&no_gap=0&offset=0&limit=50
0.353 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TGACAGCAGCATAAAGCACC&k=0&no_gap=0&offset=0&limit=45
0.359 | 0.006 | cgi_end;

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