GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:44:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES07A11, 5' end sequence.
FY384752.1:425-444
ACGGGTCGACTCGAAATCGATTGCAAAAAT425GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES16D20, 5' end sequence.
FY388242.1:414-433
ACGGGTCGACTCGAAATCGATTGCAAAAAT414GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES19L17, 5' end sequence.
FY389557.1:394-413
ACGGGTCGACTCGAAATCGATTGCAAAAAT394GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES19O03, 5' end sequence.
FY389615.1:422-441
ACGGGTCGACTCGAAATCGATTGCAAAAAT422GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Dianthus caryophyllus mRNA, clone: CES20_E05, 5' end sequence.
FY389756.1:425-444
ACGGGTCGACTCGAAATCGATTGCAAAAAT425GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
TSA: Dianthus caryophyllus mRNA, contig: CAK09.580.C1.
FX297700.1:424-443
ACGGGTCGACTCGAAATCGATTGCAAAAAT424GGTGGAATTGGGTATGTGGAAGCAAGTAGTGAGTATAAATTGGATGAACT
Papaver somniferum cultivar Roxanne chromosome 5.
CP048217.1:111829600-111829619
GGTTGAATTTATGATAGTTAATGGTTTTGA111829600GGTGGAATTGGGTATGTGGAATAAATATGTGAATTATAGTCTAGCTAGGT
Microcaecilia unicolor genome assembly, chromosome: 9.
LR594640.1:32927927-32927946
TAGTGAGCTTTAGTCATTGGTAACATATGG32927927TCCACATACCCAATTCCACCAGCACAAAGTCGTGCTTTGGACACATTCCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTGGAATTGGGTATGTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGGAATTGGGTATGTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.804 | 0.795 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGGAATTGGGTATGTGGA&k=0&no_gap=0&offset=0&limit=50
0.831 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TCCACATACCCAATTCCACC&k=0&no_gap=0&offset=0&limit=43
0.832 | 0.001 | cgi_end;

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