GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-16 10:51:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Myotis daubentonii genome assembly, chromosome: 5.
OY725364.1:94461217-94461236
ATCTTTCTATAAAAGAGGTACTTAGAGATG94461217GGTGTCAAGTTGGAAGATGGAAGAGCAGCTGGGGATGTGTGTGTGGGGGA
Scyliorhinus canicula genome assembly, chromosome: 9.
LR744038.1:139442113-139442132
TTTAATTTAAATAATATAAATTAGATAAAG139442113GGTGTCAAGTTGGAAGATGGCATGTGTGCTCTCGATGGGCAAAATATTCT
CBFS3425.fwd CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS3425 5', mRNA sequence.
FC512262.1:554-573
GCAGTATTGGACGATGATGGTTCCATTTGT554GGTGTCAAGTTGGAAGATGGGACCACGTTAGAAGCCGATGCATTGGTTGT
CBPB3425.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB3425 5', mRNA sequence.
FC527242.1:543-562
GCAGTATTGGACGATGATGGTTCCATTTGT543GGTGTCAAGTTGGAAGATGGGACCACGTTAGAAGCCGATGCATTGGTTGT
CBFS3425.rev CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS3425 3', mRNA sequence.
FC512261.1:627-646
ACAACCAATGCATCGGCTTCTAACGTGGTC627CCATCTTCCAACTTGACACCACAAATGGAACCATCATCGTCCAATACTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTGTCAAGTTGGAAGATGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGTCAAGTTGGAAGATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.232 | 0.223 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGTCAAGTTGGAAGATGG&k=0&no_gap=0&offset=0&limit=50
0.313 | 0.081 | search_minus_done; http://172.18.8.135:50400/match?q=CCATCTTCCAACTTGACACC&k=0&no_gap=0&offset=0&limit=46
0.314 | 0.001 | cgi_end;

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