GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:16:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:44270476-44270495
AACCACAAATGAAAACTTACAGAGAGTTGT44270476GGTGTTGTGTGCGAAGATTGTAATCTTCTTCTTCTTGCTCACCAATCTCT
Orthosia gothica genome assembly, chromosome: 31.
OX459065.1:15887443-15887462
ATATTATGTTTTATACTTATGTACCAATTT15887443GGTGTTGTGTGCGAAGATTGAAATCGTAATGTCCCCGGTGGGAACAAAAT
Pyrausta purpuralis genome assembly, chromosome: 20.
OZ001662.1:5180364-5180383
AGAGAGATCTTCAATTAGATTGTGCTTCAG5180364GGTGTTGTGTGCGAAGATTGATACGCCACCCCCTCTGGCGGTTTTTCTGT
Arachis hypogaea DNA, clone: AHGS45D04.
DH961618.1:493-512
AGAGATTGGTGAGCAAGAAGAAGAAGATTA493CAATCTTCGCACACAACACCACAACTCTCTGTAAGTTTTCATTTGTGGTT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:47181674-47181693
GAGAGAAATTGGTGAGCAAGAAGAAGATCA47181674CAATCTTCGCACACAACACCACAACTCTCTGTAAGTTTTCATTTGTGGTT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:47790789-47790808
GAGAGAAATTGGTGAGCAAGAAGAAGATCA47790789CAATCTTCGCACACAACACCACAACTCTCTGTAAGTTTTCATTTGTGGTT
Pyrausta purpuralis genome assembly, chromosome: 19.
OZ001661.1:23358499-23358518
ACAGAAAAACCGCCAGAGGGGGTGGCGTAT23358499CAATCTTCGCACACAACACCCTGAAGCACAATCTAATTGAAGATCTCTCT
Pyrausta purpuralis genome assembly, chromosome: 30.
OZ001672.1:1049899-1049918
ACAGAAAAACCGCCAGAGGGGGTGGCGTAT1049899CAATCTTCGCACACAACACCCTGAAGCACAATCTAATTGAAGATCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTGTTGTGTGCGAAGATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTGTTGTGTGCGAAGATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GGTGTTGTGTGCGAAGATTG&k=0&no_gap=0&offset=0&limit=50
0.159 | 0.058 | search_minus_done; http://172.18.8.135:50400/match?q=CAATCTTCGCACACAACACC&k=0&no_gap=0&offset=0&limit=47
0.162 | 0.003 | cgi_end;

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