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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:11:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

E012678-024-020-C01-SP6 MPIZ-ADIS-024-storage root Beta vulgaris cDNA clone 024-020-C01 5-PRIME, mRNA sequence.
BQ589879.1:127-145
TCCCCTGCATCTCTCTTCCCTTGTTTCTTC127GGTTCGCCGTAAAAGCTCGCCAGAGCTTCGTCGTTTGCCACCACTACGT
TSA: Beta vulgaris Locus_8175_Transcript_1/8_Confidence_0.204_Length_740 mRNA sequence.
JP500153.1:125-143
TCCCCTGCATCTCTCTTCCCTTGTTTCTTC125GGTTCGCCGTAAAAGCTCGCCAGAGCTTCGTCGTTTGCCACCACTACGT
TSA: Beta vulgaris Locus_8175_Transcript_3/8_Confidence_0.143_Length_578 mRNA sequence.
JP500154.1:125-143
TCCCCTGCATCTCTCTTCCCTTGTTTCTTC125GGTTCGCCGTAAAAGCTCGCCAGAGCTTCGTCGTTTGCCACCACTACGT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:20897092-20897110
TCCCCTGCATCTCTCTTCCCTTGTTTCTTC20897092GGTTCGCCGTAAAAGCTCGCCAGAGCTTCGTCGTTTGCCACCACTACGT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:18996534-18996552
TCCCCTGCATCTCTCTTCCCTTGTTTCTTC18996534GGTTCGCCGTAAAAGCTCGCCAGAGCTTCGTCGTTTGCCACCACTACGT
Salarias fasciatus genome assembly, chromosome: 4.
LR597439.1:3970016-3970034
TGAATATTTCTTTCCCTCCAAGAACCGCTG3970016CGAGCTTTTACGGCGAACCGCAGACGAACTATCAGGTGGATTAAAGGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTTCGCCGTAAAAGCTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTCGCCGTAAAAGCTCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.358 | 0.350 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTCGCCGTAAAAGCTCG&k=0&no_gap=0&offset=0&limit=50
0.455 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=CGAGCTTTTACGGCGAACC&k=0&no_gap=0&offset=0&limit=45
0.456 | 0.001 | cgi_end;

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