GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:53:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GQ02810.B7_N22 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02810_N22 5', mRNA sequence.
EX316581.1:254-273
AGTGCAGTTATGGGCATACTCAAATGCAAT254GGTTCTCCACCTTATCTAGTCTATGGAAAACCTCGTACAGGCACCACTGC
Cenchrus purpureus cultivar elephant grass chromosome A1.
CP053454.1:131766454-131766473
GGAATCCGTGGATCGGAAGCAAACCGCTAA131766454GGTTCTCCACCTTATCTAGTCAATCTAACCTAACATGAAGCATCGATTGC
Cenchrus americanus genome assembly, chromosome: PMC23DB5.
OX387243.1:24528238-24528257
TCAATCAAAGGATCGAAAGCAAACTCTTAA24528238GGTTCTCCACCTTATCTAGTCAATCTAACCTAACATGGAGCATTGATTGC
Cenchrus americanus genome assembly, chromosome: Pg5.
OZ001401.1:23741321-23741340
TCAATCAAAGGATCGAAAGCAAACTCTTAA23741321GGTTCTCCACCTTATCTAGTCAATCTAACCTAACATGGAGCATTGATTGC
Cenchrus purpureus cultivar elephant grass chromosome B7.
CP053467.1:9414250-9414269
GCAATCTATGTTTCATGTTAGGTTAGATCG9414250ACTAGATAAGGTGGAGAACCTTAGCGGTTTGCTTCTGATCCACGGATTGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
HG994380.1:392083189-392083208
AAAGGGAGATACTGCACCGGTATGAAGAGA392083189ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828100.1:419586318-419586337
AAAGGGAGATACTGCACCGGTATGAAGAGA419586318ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828107.2:433346952-433346971
AAAGGGAGATACTGCACCGGTATGAAGAGA433346952ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828145.1:455090802-455090821
AAAGGGAGATACTGCACCGGTATGAAGAGA455090802ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828180.1:423790432-423790451
AAAGGGAGATACTGCACCGGTATGAAGAGA423790432ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828187.1:429098856-429098875
AAAGGGAGATACTGCACCGGTATGAAGAGA429098856ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
LR828272.1:422303265-422303284
AAAGGGAGATACTGCACCGGTATGAAGAGA422303265ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX459922.1:426549942-426549961
AAAGGGAGATACTGCACCGGTATGAAGAGA426549942ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX459929.1:433665582-433665601
AAAGGGAGATACTGCACCGGTATGAAGAGA433665582ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
OX460039.1:424905832-424905851
AAAGGGAGATACTGCACCGGTATGAAGAGA424905832ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460081.1:427358325-427358344
AAAGGGAGATACTGCACCGGTATGAAGAGA427358325ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX460088.1:421725028-421725047
AAAGGGAGATACTGCACCGGTATGAAGAGA421725028ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460109.1:429056025-429056044
AAAGGGAGATACTGCACCGGTATGAAGAGA429056025ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460116.1:426917393-426917412
AAAGGGAGATACTGCACCGGTATGAAGAGA426917393ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460130.1:422463704-422463723
AAAGGGAGATACTGCACCGGTATGAAGAGA422463704ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460144.1:431818504-431818523
AAAGGGAGATACTGCACCGGTATGAAGAGA431818504ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460165.1:420532087-420532106
AAAGGGAGATACTGCACCGGTATGAAGAGA420532087ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460179.1:424763543-424763562
AAAGGGAGATACTGCACCGGTATGAAGAGA424763543ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460193.1:428082137-428082156
AAAGGGAGATACTGCACCGGTATGAAGAGA428082137ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460200.1:427565108-427565127
AAAGGGAGATACTGCACCGGTATGAAGAGA427565108ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460214.1:423403140-423403159
AAAGGGAGATACTGCACCGGTATGAAGAGA423403140ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460235.1:429906870-429906889
AAAGGGAGATACTGCACCGGTATGAAGAGA429906870ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460242.1:422164100-422164119
AAAGGGAGATACTGCACCGGTATGAAGAGA422164100ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460249.1:422539471-422539490
AAAGGGAGATACTGCACCGGTATGAAGAGA422539471ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460256.1:424524908-424524927
AAAGGGAGATACTGCACCGGTATGAAGAGA424524908ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460263.1:429197022-429197041
AAAGGGAGATACTGCACCGGTATGAAGAGA429197022ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460291.1:426397116-426397135
AAAGGGAGATACTGCACCGGTATGAAGAGA426397116ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460298.1:426579933-426579952
AAAGGGAGATACTGCACCGGTATGAAGAGA426579933ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460305.1:426961899-426961918
AAAGGGAGATACTGCACCGGTATGAAGAGA426961899ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX460312.1:425787292-425787311
AAAGGGAGATACTGCACCGGTATGAAGAGA425787292ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX638659.1:432475443-432475462
AAAGGGAGATACTGCACCGGTATGAAGAGA432475443ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX638762.1:422765989-422766008
AAAGGGAGATACTGCACCGGTATGAAGAGA422765989ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX638783.1:423680732-423680751
AAAGGGAGATACTGCACCGGTATGAAGAGA423680732ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 7H.
OX638797.1:424381551-424381570
AAAGGGAGATACTGCACCGGTATGAAGAGA424381551ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Hordeum vulgare genome assembly, chromosome: 7H.
OX638811.1:420662187-420662206
AAAGGGAGATACTGCACCGGTATGAAGAGA420662187ACTAGATAAGGTGGAGAACCTCGAAATAACTAATAGAACTCAAAACACGA
Straminergon stramineum genome assembly, chromosome: 2.
OY987264.1:15801292-15801311
AAGATGTATGTACACAATCAATACTTGAGA15801292ACTAGATAAGGTGGAGAACCTATTGTCAATTTTTGGTAACCCCTACAAAT
Cenchrus americanus genome assembly, chromosome: Pg5.
OZ001409.1:23555332-23555351
GCAATCAATGCTCCATGTTAGGTTAGATTG23555332ACTAGATAAGGTGGAGAACCTTAAGAGTTTGCTTTCGATCCTTTGATTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTTCTCCACCTTATCTAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTCTCCACCTTATCTAGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.150 | 0.142 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTCTCCACCTTATCTAGT&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=ACTAGATAAGGTGGAGAACC&k=0&no_gap=0&offset=0&limit=46
0.197 | 0.024 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).