GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:40:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Canis lupus familiaris breed Labrador retriever chromosome 15a.
CP050569.1:25071711-25071730
AAGAGCTCTGACCCGTAATCTCTGCAGCAA25071711CTAGTCAAGGAAACCAAACCCAACCTTTGTAGCAATTAGCCCCCAAAGGT
Canis lupus familiaris breed Labrador retriever chromosome 15b.
CP050620.1:25075439-25075458
AAGAGCTCTGACCCGTAATCTCTGCAGCAA25075439CTAGTCAAGGAAACCAAACCCAACCTTTGTAGCAATTAGCCCCCAAAGGT
Canis lupus genome assembly, chromosome: 15.
HG994395.1:26678028-26678047
AAGAGCTCTGACCCGTAATCTCTGCAGCAA26678028CTAGTCAAGGAAACCAAACCCAACCTTTGTAGCAATTAGCCCCCAAAGGT
tigr-gss-dog-17000327609915 Dog Library Canis lupus familiaris genomic, genomic survey sequence.
CE615764.1:484-503
AAGAGCTCTGACCCGTAATCTCTGCAGCAA484CTAGTCAAGGAAACCAAACCCAACCTTTGTAGCAATTAGCCCCCAAAGG
Pyrus communis genome assembly, chromosome: 15.
OY757082.1:7428467-7428486
CAGTTTGGTCAGGTTTCGCTCAAAGCAAAA7428467CTAGTCAAGGAAACCAAACCAATCAACTTTGGTTAGGCTGGTCTTATTCG
Sepiola atlantica genome assembly, chromosome: 36.
OY744550.1:58637259-58637278
AGTAGACGTCCTTCTCAGAATAGGAAATGT58637259CTAGTCAAGGAAACCAAACCAGTGTGTTGGTAAAGGATGCTTCAGTCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GGTTTGGTTTCCTTGACTAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTTGGTTTCCTTGACTAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GGTTTGGTTTCCTTGACTAG&k=0&no_gap=0&offset=0&limit=50
0.143 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=CTAGTCAAGGAAACCAAACC&k=0&no_gap=0&offset=0&limit=50
0.148 | 0.004 | cgi_end;

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