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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 19:07:13, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo genomic scaffold, anchoredscaffold00037.
LN681916.1:631710-631729
TTTCAAAATTAGAATTGGAAACAGGAATTG631710GGTTTGTTGAAGCCGAAAAAGAAGAGTGAAGAAGAAGAAGAAGAAGAAGA
Cucumis melo genomic chromosome, chr_11.
LN713265.1:9362725-9362744
TTTCAAAATTAGAATTGGAAACAGGAATTG9362725GGTTTGTTGAAGCCGAAAAAGAAGAGTGAAGAAGAAGAAGAAGAAGAAGA
Malachius bipustulatus genome assembly, chromosome: 2.
OU342631.1:13609612-13609631
ACAATTTTTGTTTTCTTTCTTAAAATACGA13609612GGTTTGTTGAAGCCGAAAAACTTCAGATCTTTCTCTATTCCATCAATTGC
Limnephilus lunatus genome assembly, chromosome: 2.
OU830593.1:68483245-68483264
AAAACTACGAATTTATGATGAGCAGAAATC68483245GGTTTGTTGAAGCCGAAAAATATCTAATGGGAAGCTTTGGAATCATGAAA
Sepiola atlantica genome assembly, chromosome: 33.
OY744547.1:15321761-15321780
GGTGAACTAGGATAAAAAAAAATAATACTC15321761GGTTTGTTGAAGCCGAAAAAACGAAACAGATAGCTCTCCTACTTCTTTAG
Natrix helvetica genome assembly, chromosome: W.
OZ187408.1:81867959-81867978
ATGATGGGACAAATGACCCAACCTCGATAA81867959GGTTTGTTGAAGCCGAAAAAGAAGCGCACTTCTTTTCTTCCGGGTGCAAA
Natrix maura genome assembly, chromosome: Z.
OZ211057.1:144180431-144180450
ACGATGGGACAAATGACCCAACCTCGATAA144180431GGTTTGTTGAAGCCGAAAAAGAGGCCCGCTTCCTTCCTTCCGTGGGCAAA
Cucumis melo isolate PI 511890 chromosome 11.
CP136111.1:23593177-23593196
TCTTCTTCTTCTTCTTCTTCTTCACTCTTC23593177TTTTTCGGCTTCAACAAACCCAATTCCTGTTTCCAATTCTAATTTTGAAA
Pseudomonas sp. N3-W chromosome, complete genome.
CP103965.1:2258656-2258675
CAACTGTACATCGACCTCGCCAGCGGGCCG2258656TTTTTCGGCTTCAACAAACCGGGTGCAAAACCGTCACAGGGCATGATCGA
Sarcophaga subvicina genome assembly, chromosome: 5.
OW388084.2:115652486-115652505
TTTTAATTTCATTTTTAATTTGTTTAATTT115652486TTTTTCGGCTTCAACAAACCAGAGACACTATGGACAATATGAATAAAAAC
Spisula solida genome assembly, chromosome: 8.
OX365951.1:3161223-3161242
TTGGGAAACAAATTCAATTTCGACGTTAAT3161223TTTTTCGGCTTCAACAAACCCGTCATCTTACCTGCGGGCCAGAACATTTC
Galeruca laticollis genome assembly, chromosome: 3.
OY998177.1:25584878-25584897
TCGGTTCAACAGAATTGTTTTTGTTAACGC25584878TTTTTCGGCTTCAACAAACCGAACTTTTAACAAAAGCATCATTATGCCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGTTTGTTGAAGCCGAAAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGTTTGTTGAAGCCGAAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.262 | 0.253 | search_plus_done; http://172.18.8.135:50800/match?q=GGTTTGTTGAAGCCGAAAAA&k=0&no_gap=0&offset=0&limit=50
0.363 | 0.101 | search_minus_done; http://172.18.8.135:50800/match?q=TTTTTCGGCTTCAACAAACC&k=0&no_gap=0&offset=0&limit=43
0.367 | 0.003 | cgi_end;

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