GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:02:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH018_03702m, 5' end sequence.
AB450703.1:35-56
AAAAATAAAGGCTGTTCTTCTAAAATAAAA35GTAAAGGCGGCAAATGAAACATTAATTAGGTTTTTAAAAGTTAAATAACTAC
Pyrus pyrifolia mRNA, clone: NFR2_07_36, 5' end sequence, expressed in fruit.
HX748862.1:54-75
AAAAATAAAGGCTGTTCTTCTAAAATAAAA54GTAAAGGCGGCAAATGAAACATTAATTAGGTTTTTAAAAGTTAAATAACTAC
TSA: Pyrus pyrifolia mRNA, contig: contig_7392.
FX433749.1:39-60
AAAAATAAAGGCTGTTCTTCTAAAATAAAA39GTAAAGGCGGCAAATGAAACATTAATTAGGTTTTTAAAAGTTAAATAACTAC
Mobula hypostoma genome assembly, chromosome: 24.
OY992616.1:37876450-37876471
TGTATTCTATTCCCCTTGAAATAAATGCCA37876450ATGTTTCATTTGCCGCCTTTACCACAGACTAAACCTGTAAATTAACCTCCTG
Pyrus pyrifolia mRNA, clone: NFR2_07_02, 3' end sequence, expressed in fruit.
HX739768.1:696-717
GTAGTTATTTAACTTTTAAAAACCTAATTA696ATGTTTCATTTGCCGCCTTTACTTTTATTTTAGAAGAACAGCCTTTATTTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTAAAGGCGGCAAATGAAACAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAAAGGCGGCAAATGAAACAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.222 | 0.213 | search_plus_done; http://172.18.8.135:50400/match?q=GTAAAGGCGGCAAATGAAACAT&k=0&no_gap=0&offset=0&limit=50
0.353 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=ATGTTTCATTTGCCGCCTTTAC&k=0&no_gap=0&offset=0&limit=47
0.354 | 0.001 | cgi_end;

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