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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:41:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH058_01425m, 5' end sequence.
AB450730.1:165-188
AGCCTTTCTTCTTGAATGTAAATATTGGCC165GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFR1_09_82, 3' end sequence, expressed in fruit.
HX739223.1:164-187
GCCTTTTCTTCTTGAATGTAAATATTGGCC164GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFR2_34_91, 3' end sequence, expressed in fruit.
HX740041.1:280-303
GCCTTTTCTTCTTGAATGTAAATATTGGCC280GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFW1_07_17, 3' end sequence, expressed in flower.
HX743324.1:103-126
GCCTTTTCTTCTTGAATGTAAATATTGGCC103GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGA
Pyrus pyrifolia mRNA, clone: NFR2_32_53, 5' end sequence, expressed in fruit.
HX750930.1:278-301
GCCTTTTCTTCTTGAATGTAAATATTGGCC278GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFR2_33_60, 5' end sequence, expressed in fruit.
HX751020.1:470-493
GCCTTTTCTTCTTGAATGTAAATATTGGCC470GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFW2_04_25, 5' end sequence, expressed in flower bud.
HX762340.1:179-202
AGCCTTTCTTCTTGAATGTAAATATTGGCC179GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFW2_04_38, 5' end sequence, expressed in flower bud.
HX762351.1:171-194
AGCCTTTCTTCTTGAATGTAAATATTGGCC171GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFW2_04_46, 5' end sequence, expressed in flower bud.
HX762359.1:171-194
NNCCTTTCTTCTTGAATGTAAATATTGGCC171GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Pyrus pyrifolia mRNA, clone: NFW2_17_87, 5' end sequence, expressed in flower bud.
HX763391.1:171-194
AGCCTTTCTTCTTGAATGTAAATATTGGCC171GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
TSA: Pyrus communis mRNA, contig: lc2599.
FX611186.1:215-238
GCCTTTTCTTCTTGAATGTAAATATTGGCC215GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
TSA: Pyrus communis mRNA, contig: lc24281.
FX632695.1:166-189
GCCTTTTCTTCTTGAATGTAAATATTGGCC166GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
TSA: Pyrus x bretschneideri Unigene3870_XinShao mRNA sequence.
JR599180.1:343-366
GCCTTCTCTTCTTGAATGTAAATATTGGCC343GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAAACATGAA
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:528901-528924
GCCTTTTCTTCTTGAATGTAAATATTGGCC528901GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCGAACATGAA
Pyrus communis genome assembly, chromosome: 13.
OY757080.1:496917-496940
GCCTTTTCTTCTTGAATGTAAATATTGGCC496917GTAACGAAAAGGAAACAGGACTTGAGCATGCTCTCTTGACGCCCCAATCATGAA
Pyrus communis EST, clone L1068.
AJ504736.1:128-151
TTCATGTTTGGGGCGTCAAGAGAGCATGCT128CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus communis EST, clone L523.
AJ504751.1:185-208
TTCATGTTTGGGGCGTCAAGAGAGCATGCT185CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus communis EST, clone L649.
AJ504861.1:339-362
TTCATGTTTGGGGCGTCAAGAGAGCATGCT339CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus communis EST, clone L1068.
AJ504871.1:128-151
TTCATGTTTGGGGCGTCAAGAGAGCATGCT128CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus pyrifolia mRNA, clone: NFR2_33_60, 3' end sequence, expressed in fruit.
HX740020.1:464-487
TTCATGTTTGGGGCGTCAAGAGAGCATGCT464CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus pyrifolia mRNA, clone: NFR2_34_91, 5' end sequence, expressed in fruit.
HX751135.1:374-397
TTCATGTTTGGGGCGTCAAGAGAGCATGCT374CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus pyrifolia mRNA, clone: NFR6_01_63, 5' end sequence, expressed in fruit.
HX758950.1:170-193
TTCATGTTTGGGGCGTCAAGAGAGCATGCT170CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus pyrifolia mRNA, clone: NFR6_20_67, 5' end sequence, expressed in fruit.
HX760416.1:289-312
TTCATGTTTGGGGCGTCAAGAGAGCATGCT289CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAGGCT
Pyrus pyrifolia mRNA, clone: NFW1_07_17, 5' end sequence, expressed in flower bud.
HX761657.1:151-174
TTCATGTTTGGGGCGTCAAGAGAGCATGCT151CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
Pyrus pyrifolia mRNA, clone: NFW1_10_07, 5' end sequence, expressed in flower bud.
HX761885.1:273-296
TTCATGTTTGGGGCGTCAAGAGAGCATGCT273CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc118.
FX608705.1:355-378
TTCATGTTTGGGGCGTCAAGAGAGCATGCT355CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc558.
FX609145.1:284-307
TTCATGTTTGGGGCGTCAAGAGAGCATGCT284CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc749.
FX609336.1:350-373
TTCATGTTTGGGGCGTCAAGAGAGCATGCT350CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc1199.
FX609786.1:226-249
TTCATGTTTGGGGCGTCAAGAGAGCATGCT226CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc1884.
FX610471.1:17-40
GTCAAGAGAGCATGCT17CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAACAAGCTCTGCT
TSA: Pyrus communis mRNA, contig: lc2076.
FX610663.1:310-333
TTCATGTTTGGGGCGTCAAGAGAGCATGCT310CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc2244.
FX610831.1:301-324
TTCATGTTTGGGGCGTCAAGAGAGCATGCT301CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc6603.
FX615188.1:322-345
TTCATGTTTGGGGCGTCAAGAGAGCATGCT322CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc6695.
FX615280.1:296-319
TTCATGTTTGGGGCGTCAAGAGAGCATGCT296CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc8072.
FX616657.1:357-380
TTCATGTTTGGGGCGTCAAGAGAGCATGCT357CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc16821.
FX625379.1:958-981
GATGAATATGAGTNGTTNCGNGAGCATGCT958CAAGTCCTGTTTCCTTTTCGTTACGG
TSA: Pyrus communis mRNA, contig: lc18541.
FX627079.1:286-309
TTCATGTTTGGGGCGTCAAGAGAGCATGCT286CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc22415.
FX630884.1:275-298
TTCATGTTTGGGGCGTCAAGAGAGCATGCT275CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACATTCAAGAAGNAAGGCTTC
TSA: Pyrus communis mRNA, contig: lc23357.
FX631802.1:381-404
TTCATGTTTGGGGCGTCAAGAGAGCATGCT381CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc26522.
FX634855.1:265-288
TTCATGTTTGGGGCGTCAAGAGAGCATGCT265CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACANCAAGAAGNAAGGCTT
TSA: Pyrus communis mRNA, contig: lc27423.
FX635725.1:271-294
AGGTGNCATGNGGCGTCAAGAGAGCATGCT271CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAANTTTNCANCAN
TSA: Pyrus communis mRNA, contig: lc27524.
FX635821.1:240-263
TTCATGTTTGGGGCGTCAAGAGAGCATGCT240CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAANGGCTTCT
TSA: Pyrus communis mRNA, contig: lc28113.
FX636384.1:296-319
TTCATGTTTGGGGCGTCAAGAGAGCATGCT296CAAGTCCTGTTTCCTTTTCGTTACGGCCAATNAANAAGAAGNAAGGCTTCTTTC
TSA: Pyrus communis mRNA, contig: lc28614.
FX636865.1:228-251
TTCATGTTTGGGGCGTCAAGAGAGCATGCT228CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAGGC
TSA: Pyrus communis mRNA, contig: lc29328.
FX637550.1:264-287
GTNATGTTTGGGGCGTCAAGAGTGCATGCT264CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANCANAGNGNAAAGGCTTCTTTC
TSA: Pyrus communis mRNA, contig: lc35649.
FX643389.1:253-276
TTCATGTTTGGGGCGTCAAGAGAGCATGCT253CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACNAAGAAGNGGCTTCTTTCA
TSA: Pyrus communis mRNA, contig: lc35789.
FX643516.1:243-266
ATCAGGTNCATGNCNTCAAGAGAGCATGCT243CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANCATTCAAGAAGNGGCTTCTTC
TSA: Pyrus communis mRNA, contig: lc35795.
FX643522.1:293-316
TTCATGTTTGGGGCNTCAAGAGAGCATGCT293CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACANAAGAAGNGGCTTCTT
TSA: Pyrus communis mRNA, contig: lc36049.
FX643748.1:292-315
TTCATGTTTGGGGCGTCAAGAGAGCATGCT292CAAGTCCTGTTTCCTTTTCGTTACGGCCAA
TSA: Pyrus communis mRNA, contig: lc36318.
FX643996.1:248-271
ATCAGGTGNCATNCNTCAAGAGAGCATGCT248CAAGTCCTGTTTCCTTTTCGTTACGGNAATATTTACANCAAGNGGCTTCNCACA
TSA: Pyrus communis mRNA, contig: lc36736.
FX644377.1:277-300
TTCATGTTTGGGGCGTCAAGAGAGCATGCT277CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACNANAAAAGAAGNGGGGC
TSA: Pyrus communis mRNA, contig: lc36815.
FX644450.1:246-269
TCAGGTNCATNGGCGTCAAGAGAGCATGCT246CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACANGGCTTCNCACNAA
TSA: Pyrus communis mRNA, contig: lc36833.
FX644468.1:284-307
GNCATGTTTGGGGCGTCAAGAGAGCATGCT284CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANANAAGAAGNAGGCTTCTTTCA
TSA: Pyrus communis mRNA, contig: lc36954.
FX644582.1:260-283
TTCATGTTTGGGGCNTCAAGAGAGCATGCT260CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANCATTCAANGNTGCTTCNCACA
TSA: Pyrus communis mRNA, contig: lc37153.
FX644763.1:243-266
TTCATGTTTGGGGCGTCAAGAGAGCATGCT243CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTACAATTCAANAAAGGCTNCA
TSA: Pyrus communis mRNA, contig: lc37301.
FX644899.1:264-287
TTTCATGTTTNGGCGTCAAGAGAGCATGCT264CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACANCAAGAAGAAAAGGCTTC
TSA: Pyrus communis mRNA, contig: lc37550.
FX645134.1:285-308
TTCATGTTTGGGGCGTCAAGAGAGCATGCT285CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGANGNGGCTTC
TSA: Pyrus communis mRNA, contig: lc37959.
FX645502.1:229-252
TTCATGTTTGGGGCGTCAAGAGAGCATGCT229CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAANAANCTTC
TSA: Pyrus communis mRNA, contig: lc38056.
FX645593.1:252-275
GNCATGTTTGGGGCGTCAAGAGAGCATGCT252CAAGTCCTGTTTCCTTTTCGTTACGGCCAATANACANAANGNGGCTNCAGNAAG
TSA: Pyrus communis mRNA, contig: lc38171.
FX645698.1:305-328
TTCATGTTTGGGGCGTCAAGAGAGCATGCT305CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATNACATTCAANCTTCNCAC
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:29807985-29808008
TTCATGTTTGGGGCGTCAAGAGAGCATGCT29807985CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAAGG
Malus x robusta genome assembly, chromosome: 15.
OY720339.1:30415973-30415996
TTCATGTTTGGGGCGTCCAGAGAGCATGCT30415973CAAGTCCTGTTTCCTTTTCGTTACGGCCAATATTTACATTCAAGAAGAAAAAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTAACGAAAAGGAAACAGGACTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAACGAAAAGGAAACAGGACTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.502 | 1.493 | search_plus_done; http://172.18.8.135:50400/match?q=GTAACGAAAAGGAAACAGGACTTG&k=0&no_gap=0&offset=0&limit=50
2.299 | 0.797 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGTCCTGTTTCCTTTTCGTTAC&k=0&no_gap=0&offset=0&limit=35
2.329 | 0.030 | cgi_end;

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