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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:53:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 15.
CP133516.1:7849483-7849501
GAACACCCAAAGTGAGGGGTCGTACGCACT7849483GTAAGCCAGGAGGATGGTATACATTGATTGAGGAAAAAAATCATAAGCA
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 15.
CP133539.1:8184594-8184612
GAACACCCAAAGTGAGGGGTCGTACGCACT8184594GTAAGCCAGGAGGATGGTATACATTGATTGAGGAAAAAATCATAAGCAC
Microcaecilia unicolor genome assembly, chromosome: 2.
LR594633.1:379573494-379573512
GTGTCTCTTGGTGGCCCTGGCATAAGGAGG379573494GTAAGCCAGGAGGATGGTACTGGTGAGCTGTGCTGCACGTTCAAGTGAT
Microcaecilia unicolor genome assembly, chromosome: 2.
LR594633.1:379599575-379599593
GTGTCTCTTGGTGGCCCTGGCATAAGGAGG379599575GTAAGCCAGGAGGATGGTACTGGTGAGCTGTGCTGCACGTTCAAGTGAT
Gadus morhua genome assembly, chromosome: 15.
LR633957.1:10946484-10946502
GAACACCCAAAGTGAGGGGTCGTATGCACT10946484GTAAGCCAGGAGGATGGTATACATTGATTGAGGAAAAAATCATAAGCAC
Erithacus rubecula genome assembly, chromosome: 8.
LR812110.1:19269562-19269580
ACAATGCATTTGAAATTCCAGTTTTATCAG19269562GTAAGCCAGGAGGATGGTAAATTCTAGACCTCAGTGCATATATGTGAGC
Pollachius pollachius genome assembly, chromosome: 2.
OX465125.1:9640748-9640766
GAACACCCAAAGTGAGGGCTCGTACGCACT9640748GTAAGCCAGGAGGATGGTATGCATTGATTGAGGAAAAAAATCATAAGCA
Cinclus cinclus genome assembly, chromosome: 9.
OY759686.1:10803215-10803233
ACAATGCAATTGAAATTCCAATTTTATCAG10803215GTAAGCCAGGAGGATGGTAAATTCTAGACCTTAGTGCATTTATGTGAGC
av02091h03r1.1 Symbiotic sea anemone (Anemonia viridis) cDNA library Anemonia viridis cDNA, mRNA sequence.
FK727617.1:1-19
1GTAAGCCAGGAGGATGGTATTCGTGTGTTGATCTCTGCGGCCTCTCCGG
DP-KSU_003_B03_9 EST-DP-sukary library Phoenix dactylifera cDNA clone DP-KSU_003_B03_9, mRNA sequence.
JZ767539.1:174-192
GACGATGAGGAGCACCCTTTCGCCAAGGTT174GTAAGCCAGGAGGATGGTAGCCACACACACATGGTCTGGAATCCAGGAT
Tyria jacobaeae genome assembly, chromosome: 21.
OX387228.1:14943247-14943265
AAATAGCTTAAAAAGTCTTTAATCTCTTTA14943247GTAAGCCAGGAGGATGGTAGATGTTTTATCTTCACGGCGCGTTTAGGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTAAGCCAGGAGGATGGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAAGCCAGGAGGATGGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.468 | 0.460 | search_plus_done; http://172.18.8.135:50400/match?q=GTAAGCCAGGAGGATGGTA&k=0&no_gap=0&offset=0&limit=50
0.575 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=TACCATCCTCCTGGCTTAC&k=0&no_gap=0&offset=0&limit=39
0.575 | 0.000 | cgi_end;

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