GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:06:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Papaver somniferum cultivar Roxanne chromosome 3.
CP048215.1:243210895-243210914
CCATCTTCCTTCTCTCCTTCTCCTTTGATT243210895GTAAGTGTGTTCTGTTCAACAGAGACTTTAACATTCTCCTTGCCAAGTCC
Papaver somniferum cultivar Roxanne chromosome 7.
CP048219.1:77429512-77429531
CCGTCTTCTTTCTCTCCTTCTCCTTTGATT77429512GTAAGTGTGTTCTGTTCAACAGAGACTTTGACATTCTCCTTACCAAGTCC
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:7544682-7544701
TCACTTTCTTTAGCACCTTCACCTTTAATA7544682GTAAGTGTGTTCTGTTCAACAGAAATCTTCACATCTTCCTTACTCAGTCC
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:8625077-8625096
TCACTTTCTTTAGCACCTTCACCTTTGATA8625077GTAAGTGTGTTCTGTTCAACAGAGATCTTCACATCTTCCTTACTCAGTCC
Trifolium repens mRNA, clone: WCC41h22_060, unspecified EST.
FY468633.1:456-475
GGACTGAGTAAGGAAGATGTGAAGATTTCT456GTTGAACAGAACACACTTACTATTAAAGGTGAAGGCGCTAAAGAAAGTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTAAGTGTGTTCTGTTCAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAAGTGTGTTCTGTTCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=GTAAGTGTGTTCTGTTCAAC&k=0&no_gap=0&offset=0&limit=50
0.218 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGAACAGAACACACTTAC&k=0&no_gap=0&offset=0&limit=46
0.219 | 0.001 | cgi_end;

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