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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:59:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Pelobates cultripes genome assembly, chromosome: 07.
OW240918.1:3809425-3809444
GTGATTAAGGGAAAAGCAGATATCCTGGCT3809425GTAATCAAAACACTTCTCCAAAATAAAAGAATACATGTATTAATTAATAT
Xyrichtys novacula genome assembly, chromosome: 22.
OY660885.1:4255177-4255196
GTTTGAACACTTGAGTGAAGTTTGCTGAAA4255177GTAATCAAAACACTTCTCCACTCAATATCGATTTATGCTCCACTCTAAAT
Pinus sylvestris EST, clone WZ0APSCA9YE21NM1.
HE627643.1:29-48
AAGTGATCAAAACACCACCCCATTAGAT29GTAATCAAAACACTTCTCCAAATTGAGAATTATTAACCGTCCAACCCAGA
Harmothoe impar genome assembly, chromosome: 11.
OX381714.1:61536456-61536475
TTTTATATAGCTCGCCCTGCCATTATGCAT61536456GTAATCAAAACACTTCTCCACAGAATGCATTTTTTAAAATTAGTGCAAAG
Beris chalybata genome assembly, chromosome: 3.
OX421896.1:29391892-29391911
GAAGAAACAATATCAACACCATTATCCAAA29391892GTAATCAAAACACTTCTCCATCCAGCAGCCATTGTATCTTATAATGAAAA
Beris morrisii genome assembly, chromosome: 2.
OX638311.1:47883366-47883385
GAAGAAACAATATCAACACCATTACCCAAA47883366GTAATCAAAACACTTCTCCATCCAGCAGCCATTCTATCTTATAATGAAAA
Echeneis naucrates genome assembly, chromosome: 14.
LR584055.1:8468835-8468854
GCAGGAGAGCAGGAGCACTGGGGATAAATA8468835TGGAGAAGTGTTTTGATTACCTATGAGCCTGTTCAGCTCTGTGTTGGTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTAATCAAAACACTTCTCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAATCAAAACACTTCTCCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.273 | 0.264 | search_plus_done; http://172.18.8.135:50400/match?q=GTAATCAAAACACTTCTCCA&k=0&no_gap=0&offset=0&limit=50
0.384 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGAAGTGTTTTGATTAC&k=0&no_gap=0&offset=0&limit=44
0.385 | 0.001 | cgi_end;

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